Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0698 ATGAATCGTAAGCGAGACAGGCACTATTTTTACCGCCAGGACGCCGCCGCCAAGCGCCGCCGCCCCTTACCAGAGCCCGTGGAGGAGGAGAGACCGACGACGAGGCCTGCGCCGCCTTCCGCGGTGGTCGTGATGGGCCTCCCTCAAGACTGCTCCGTCCTCGATCTCAAGTCTCGCTTCGAGATCTACGGCGCCATCTCCCGCATCCGCATTGACCGCGATGCCGTCGGCTACATTACTTACCGGTCAAAGGACTCCGCCGACGCCGCCATAGCCGCCGGTGTTGACCCCTCCTTCGGAATCACCATTAGCTCCAAAAAGGTTCAGGTGTTGTGGGCAACAGACCCTCTAGCCATGTGGAGGGAAGGAGTTGGTAATAGGAAGGATAAAGGGTATATGTCAAAGCTTGTGCGTGCTGAGGCACCTTTGAGCAAGCATGGAAGAGGTAATAGACTTGCTTCAGCTACAGGGAACACTAAAGATGGTGAGAATAGCTCAGGTAGCTCAGTTTCAGAAGTGCCTTTCAAGGGCCGAGAAATTGTTGCTTATGATGATATCCTCTAA 564 0.5532 MNRKRDRHYFYRQDAAAKRRRPLPEPVEEERPTTRPAPPSAVVVMGLPQDCSVLDLKSRFEIYGAISRIRIDRDAVGYITYRSKDSADAAIAAGVDPSFGITISSKKVQVLWATDPLAMWREGVGNRKDKGYMSKLVRAEAPLSKHGRGNRLASATGNTKDGENSSGSSVSEVPFKGREIVAYDDIL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0698 187 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 115 IPR000504 GO:0003723
Pvu2g0698 187 SMART rrm1_1 41 111 IPR000504 GO:0003723
Pvu2g0698 187 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 92 IPR000504 GO:0003723
Pvu2g0698 187 MobiDBLite consensus disorder prediction 7 32 - -
Pvu2g0698 187 CDD RRM_SF 42 110 - -
Pvu2g0698 187 MobiDBLite consensus disorder prediction 145 172 - -
Pvu2g0698 187 MobiDBLite consensus disorder prediction 151 172 - -
Pvu2g0698 187 Gene3D - 9 170 IPR012677 -
Pvu2g0698 187 MobiDBLite consensus disorder prediction 1 39 - -
Pvu2g0698 187 SUPERFAMILY RNA-binding domain, RBD 26 122 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0698 Pvu-Chr2 8200256 8201891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0698 1 187 Homeobox Transcription Factor Family AT1G27050 52.657 1.65e-59 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0698 - - gmx:106797175 276.559