Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0697 ATGGCGGGTGGCAAGCTTCATCCTGGTTCAAACATGTCACTTCTCCTCCAAAACGACAGGCTCCCTTGCTCCTCTGAAGTCCTTGAGTCTCTTTGGGCTCACACCTCTAACGCTGCTTCCTTCCAAGGTTCAAAATCTATGGTTGATTTTGAGAATGTTAGTGGGGGCAGGGTGACGGATAGGCCCTTTTTTCAAGCGTTGGAGAAGGAAGATAACTGTGATGATGATTATGAGGGTTGCTTCCATCAACCGGGTAAGAAAAGGAGGCTCACAAGCGAACAAGTTCAGTTCCTTGAAAGGAACTTTGAGGTCGAGAACAAGCTTGAACCTGAAAGGAAGGTCCAACTTGCAAAGGAGCTTGGCTTGCAGCCAAGGCAAGTGGCTATATGGTTCCAAAACCGAAGGGCAAGGTTCAAGACCAAGCAGCTAGAAAAAGATTATGGCACATTGAAAGCTAGCTATGACAGACTCAAAGGTGACTATGAAAGTCTTCTTCAAGAGAATGACAAGTTAAAAGCAGAGGTGAATTCTCTGGAGAGCAAATTGATTCTTAGAGATAAAGAGAAGGAGAATTCGGACGACAAGTCATCTCCTGATGCTGTCAATTCACCCCACAAAGAGCCTATGGATTTAATTTCAAATTCAACATCTGAAAATGGGACCAAAGTGTCACTCCCTATTATGGTAACATGCAAGCAAGAAGATGCCAATTCAGCCAAAAGTGATGTGCTTGATTCGGACAGCCCACATTGCACTGATGGGAACCATCCCTCTTCATTCGTGGAGCCTGCTGATTCCTCCCATGCTTTTGAACCAGACCACTCCGACTTCTCCCAAGATGAAGAGGATAATCTTAGTGAAAGCCTTTTGACCCTCCCTTGCTTACCAAAGGTTGAAGAAGCCTGCTATGATGACCCTCCTGAAAACCCTTGTAATTTTGGCTTCCATGTCGAGGATCAAACCTTCTGTTTCTGGCCCTATTGA 984 0.4533 MAGGKLHPGSNMSLLLQNDRLPCSSEVLESLWAHTSNAASFQGSKSMVDFENVSGGRVTDRPFFQALEKEDNCDDDYEGCFHQPGKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYGTLKASYDRLKGDYESLLQENDKLKAEVNSLESKLILRDKEKENSDDKSSPDAVNSPHKEPMDLISNSTSENGTKVSLPIMVTCKQEDANSAKSDVLDSDSPHCTDGNHPSSFVEPADSSHAFEPDHSDFSQDEEDNLSESLLTLPCLPKVEEACYDDPPENPCNFGFHVEDQTFCFWPY* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0697 327 Pfam Homeodomain 86 139 IPR001356 GO:0003677
Pvu2g0697 327 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 327 IPR045224 GO:0003700
Pvu2g0697 327 MobiDBLite consensus disorder prediction 183 220 - -
Pvu2g0697 327 Gene3D - 80 147 - -
Pvu2g0697 327 ProSitePatterns 'Homeobox' domain signature. 116 139 IPR017970 GO:0000981|GO:0006355
Pvu2g0697 327 SMART HOX_1 83 145 IPR001356 GO:0003677
Pvu2g0697 327 Coils Coil 154 181 - -
Pvu2g0697 327 MobiDBLite consensus disorder prediction 267 281 - -
Pvu2g0697 327 Pfam Homeobox associated leucine zipper 141 182 IPR003106 GO:0006355|GO:0043565
Pvu2g0697 327 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 1 327 - -
Pvu2g0697 327 MobiDBLite consensus disorder prediction 183 201 - -
Pvu2g0697 327 CDD homeodomain 84 142 IPR001356 GO:0003677
Pvu2g0697 327 MobiDBLite consensus disorder prediction 238 285 - -
Pvu2g0697 327 SUPERFAMILY Homeodomain-like 76 143 IPR009057 -
Pvu2g0697 327 PRINTS Lambda-repressor HTH signature 112 121 IPR000047 GO:0003677
Pvu2g0697 327 PRINTS Lambda-repressor HTH signature 121 137 IPR000047 GO:0003677
Pvu2g0697 327 ProSiteProfiles 'Homeobox' domain profile. 81 141 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0697 Pvu-Chr2 8154166 8156347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0697 43 274 Homeobox Transcription Factor Family AT3G01470 42.735 5.74e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pvu2g0697 Homeodomain 3.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0697 - K09338 gmx:547565 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0697 2 8154166 8156347 Pvu2g0697 2 8154166 8156347 ECH
Pvu3g0727 3 10470873 10473078 Pvu2g0697 2 8154166 8156347 PCT