Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0662 ATGAAGAAAGTAGTCTATCTCGTCTTTTTATGCAACCTTTCACTTCTCATCAAATTACTACTGCTATCAAAGACTGTTATAGCAGAACCAAGGGCCAAGACCGTCCTAATAACATGTGGCCATGTACGAGAGCACAATACTACTATCTTTGTTCCCAATTTTGTTGCAACTATGGATAAGATCAGTGATGAGATGCGCAAAACTGGCTTTGGCACAGCAGTTGTAGGGACAGGACCTGATACTAACTATGGCCTGGCCCAGTGTTATGGAGATCTTTCATTGCTTGACTGTGTATTGTGCTATGCTGAGGCACGCACGGTTCTTCCCCAGTGCTACCCTTATAATTCTGGTCGCATTTTCCTTGATGGTTGCTTCATGAGGGCTGAGAATTATAGTTTCTTTAATGAGTATACAGGACCAGGAGACAAAGCTGTATGTGGGAACATGACCAAGAAGAATTCAAGTTTTCAAGCAGCAGCAAAGGAAGCAGTTTCAAGAGCAGTTCAAGATGCACCCAACAACAAAGGATATGCCAGAGGGAATGTTGCTGTGGAAGGAGCAACTAACCAATCTGTTTATGTTCTGGCTGATTGTTGGAGGACTTTGGACAAAAGGTCTTGCAAAGCATGTCTTGAGAATGCATTTTTTTCCTTATTGGGATGCTTGCCCTGGTCAGAAGGACGAGCGCTCAACACGGGCTGCTTCATGAGGTACTCAGACAAAGATTTTCTTAACAAAGAGCAAGAAACTGGGAGTTCAAGAGGTAATGTGGCAGTAATAGTGGTTGTAGTAGTTAGTTCGGTGATTGTTTCCGTGGTTGGAGTGACTATTGGAGTTTATATATGGAAACAAAGATACATTCAGAAGAAACGAAGAGGTTCAAATGATGCAGAAAAGCTAGCAAAATCACTTCAGAACAAAAGCTTGAACTTCAAGTACTCTACATTGGACAAGGCTACTGGATCTTTTCATGAAAATAACAAGTTAGGGCAAGGAGGATTTGGAACAGTTTATAAAGGAGTTCTAGCTGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAACAACAGACAAAGAGCAGCAGATTTCTACAACGAAGTCAACATAATTAGTAGTTTGGAACACAAGAATCTGGTCAGACTGTTAGGATGCAGTTGTTCAGGACCTGAAAGTCTGCTTGTTTATGAATTTCTGCCCAATAAAAGTCTTGATCGCTTCATTTTTGATAAAAACAAGGGCAAAGAATTGAACTGGGAAAAGAGATTTGAAATTATCATCGGGACAACCGAAGGATTAGTTTATCTGCATGAGAACTCTAAGACAAGGATAATTCACAGAGATATAAAAGCCAGCAACATCCTGTTGGATGCAAAGTTTCGTGCTAAAATTGCAGATTTTGGTTTGGCCAGGTCCTTTCAAGAGGACAAGAGCCATATAAGTACAGCCATTGCAGGAACTTTGGGGTATATGGCTCCTGAGTACTTGGCACATGGTCAGTTAACAGAAAAGGCAGATGTATATAGTTTTGGAGTGTTGCTGCTAGAGATGGTCACTGGTAGACAGAACAACAGGAGCAAAGTATCCGAGTATTCAGACAGCTTGGTTACAGTGGCATGGAAGCATTTTCAGGCAGGGACTGCTGAACAATTATTTGACCCAAATCTAGTTTTACAGGAAGACCACAACAGCGAGGTTAAGGATGAGATTTTAAGAGTGGTTCACATAGGACTTCTATGCACCCAAGAGGTCCCTTCTTTACGACCGATCATGTCAAAGACGTTACAGATGCTAACAAAGAAGGAGGAGAATCTTATTGCTCCCTCTAATCCACCCTTCCTGGATGAGAATACCATGGAACTTCATGACACAAGTGGTGACCCATTTTATCCTCTTAATGCAGCTGATTCAATCGCTACCATGTCCCGTAGCTCATTTTATCCCAGGTGA 1950 0.4159 MKKVVYLVFLCNLSLLIKLLLLSKTVIAEPRAKTVLITCGHVREHNTTIFVPNFVATMDKISDEMRKTGFGTAVVGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCYPYNSGRIFLDGCFMRAENYSFFNEYTGPGDKAVCGNMTKKNSSFQAAAKEAVSRAVQDAPNNKGYARGNVAVEGATNQSVYVLADCWRTLDKRSCKACLENAFFSLLGCLPWSEGRALNTGCFMRYSDKDFLNKEQETGSSRGNVAVIVVVVVSSVIVSVVGVTIGVYIWKQRYIQKKRRGSNDAEKLAKSLQNKSLNFKYSTLDKATGSFHENNKLGQGGFGTVYKGVLADGREIAIKRLYFNNRQRAADFYNEVNIISSLEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDKNKGKELNWEKRFEIIIGTTEGLVYLHENSKTRIIHRDIKASNILLDAKFRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEMVTGRQNNRSKVSEYSDSLVTVAWKHFQAGTAEQLFDPNLVLQEDHNSEVKDEILRVVHIGLLCTQEVPSLRPIMSKTLQMLTKKEENLIAPSNPPFLDENTMELHDTSGDPFYPLNAADSIATMSRSSFYPR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0662 649 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Pvu2g0662 649 Gene3D Transferase(Phosphotransferase) domain 1 399 609 - -
Pvu2g0662 649 Coils Coil 287 307 - -
Pvu2g0662 649 ProSiteProfiles Protein kinase domain profile. 323 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0662 649 Pfam Protein kinase domain 323 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0662 649 SMART serkin_6 323 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0662 649 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Pvu2g0662 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Pvu2g0662 649 Gene3D - 143 243 IPR038408 -
Pvu2g0662 649 Gene3D - 33 133 IPR038408 -
Pvu2g0662 649 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 13 630 - -
Pvu2g0662 649 ProSiteProfiles Gnk2-homologous domain profile. 32 133 IPR002902 -
Pvu2g0662 649 Gene3D Phosphorylase Kinase; domain 1 283 398 - -
Pvu2g0662 649 Pfam Salt stress response/antifungal 146 240 IPR002902 -
Pvu2g0662 649 Pfam Salt stress response/antifungal 49 131 IPR002902 -
Pvu2g0662 649 CDD STKc_IRAK 329 600 - -
Pvu2g0662 649 SUPERFAMILY Protein kinase-like (PK-like) 307 620 IPR011009 -
Pvu2g0662 649 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 13 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0662 Pvu-Chr2 7203777 7207149 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0662 2 649 Receptor kinase-like Gene Family AT1G70520 66.513 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu2g0662 Pkinase 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0662 - - gmx:100305420 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0645 3 8584907 8588683 Pvu2g0662 2 7203777 7207149 PCT