Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0653 ATGGCTTCCCTTTTAGTAGTGCTCCTGGTCTTCTTCACCTGTATATTCCATGCAACAACAGTGACGTCTACAACATACCACGACCGTACCTTCAAGACATTCTCTTCCGCCAACGCCTCCAACAACCACCAGTGGGTCGGACCCATCGGTCACCGTAAAATCACGGTTGACATTAACGGCGGTGGCCACTACCGGTCCGTTCAAGACGCCGTCAATGCCGTCCCCGACAACAACCGAAGGAATATCCTCATTCAAATCAACGCCGGATGCTACAAAGAAAAGGTGGTGGTGCCCGTGACGAAGCCGTACATAACGTTTGAGGGCGCGGGTAAAGAAGTTACGGTGATAGAATGGCATGATCGAGCAAGTGACCCCGGTCCCAGTGGACAGCAACTGCGTACTTACAGAACCGCTTCCGTTACTGTTTTTGCCCCCTATTTTTCTGCCAGAAACATAAGCTTCAAGAACACGGCGCCTGCGCCAATGCCGGGGATGCAGGGATGGCAAGCGGTGGCGTTTCGCATATCCGGCGACAAGGCATACTTCTCCGGCTGCGGCTTCTACGGCGCACAGGACACACTTTGTGACGATGCTGGCCGACATTACTTCAAGGAATGCTACATTGAAGGATCCATCGATTTCATCTTTGGCAATGGCAGGTCCATGTACAAGGATTGCTGGCTACACTCAATAGCAACGAGGTTTGGGTCGATAGCAGCCCACGACAGGAAGCAGAAGGAGGAGAAGACAGGGTTTGCATTCGTAGGATGCAGGGTGACAGGTACAGGTCCACTGTACGTGGGACGAGCAATGGGACAGTACTCTAGAATCGTCTACTCCTACACATATTTCGATGACATTGTTGCACATGGTGGTTGGGATGATTGGGACCATGCCAACAATAAGAACAAGACTGTGTTCTTCGGAGTGTACAAGTGTTGGGGAGCAGGAGCAGAGGCTGTGCGTGGGGTCTCACTGGCACGAGACTTGGATTTTGAGACGGCTCATCCATTTATCAGAAAGAGTTTCGTCAATGGCAGACACTGGATCGCACCATCTGATGCTTAA 1068 0.5159 MASLLVVLLVFFTCIFHATTVTSTTYHDRTFKTFSSANASNNHQWVGPIGHRKITVDINGGGHYRSVQDAVNAVPDNNRRNILIQINAGCYKEKVVVPVTKPYITFEGAGKEVTVIEWHDRASDPGPSGQQLRTYRTASVTVFAPYFSARNISFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCWLHSIATRFGSIAAHDRKQKEEKTGFAFVGCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHANNKNKTVFFGVYKCWGAGAEAVRGVSLARDLDFETAHPFIRKSFVNGRHWIAPSDA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0653 355 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 354 - -
Pvu2g0653 355 Pfam Pectinesterase 54 346 IPR000070 GO:0030599|GO:0042545
Pvu2g0653 355 ProSitePatterns Pectinesterase signature 2. 208 217 IPR033131 -
Pvu2g0653 355 Gene3D - 50 354 IPR012334 -
Pvu2g0653 355 SUPERFAMILY Pectin lyase-like 52 352 IPR011050 -
Pvu2g0653 355 PANTHER PECTINESTERASE 68-RELATED 11 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0653 Pvu-Chr2 7024916 7027439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0653 1 355 Carbohydrate Esterase AT5G47500 72.067 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0653 - - gmx:100816190 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0653 2 7024916 7027439 Pvu2g0653 2 7024916 7027439 ECH
Pvu2g0653 2 7024916 7027439 Pvu3g2271 3 43767814 43772398 PCT