Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0631 ATGAATACTTATTCACATGTTCCTCCTGGATTTCGTTTCCATCCCACCGATGAAGAACTTGTTCATTACTACCTTAAGAAAAAGGTAGCTTCTAAAAGGATTGACATAGATGTGATAAAAGATGTCGATCTCTATAAAATCGAGCCATGGGATCTTCAAGAATTATGCAAAAATGGAAGCCATGAACAAGATGAATGGTATTTCTTTAGTCATAAGGACAAGAAGTACCCAACAGGCACTCGTACCAATAGAGCTACAAAAGCAGGATTCTGGAAAGCTACTGGGAGAGACAAGGCAATTTACTGTAAGCATTGCCTTACTGGAATGAGAAAGACTCTTGTGTTTTACAAAGGAAGAGCACCCAATGGACAGAAATCTGACTGGATCATGCATGAGTATCGACTAGAAACCAATGAAAATGGAACTCCTCAGGAAGAAGGGTGGGTTGTATGTAGAGTGTTCAAAAAACGAATGACAACAGTGAGGAAAATGGGGGATTACGTGTCGCCATGTTGGTATGATGACCAAGTCTCGTTCATGCAAGAACTTGAATCTCCTATGCGAATTTCTAACCCTAATGCACCAAACCGTGACCTCTATCCCTGCAAGAAGGAGTTGGAATTGCAATTCAATATTCCCCATGACGCTTTTCTCCAACTTCCACAGCTTGAAGGTCCCATAGTTCCTCAATCTGTGGCTAGTTTGAGTTTTAGCCCATTTGTTTCTTACGGCTATGGTTGCAAGAACAATGGAAATGCTTTGCAGTCTTCGTCACTCACTCAAGAACATCGCCAGCAACAAAGTCTTCAATTTCACTATGCTAGTAACGATCAATCTATGGACAATGTTATGGATTGGCGAGTACTTGACAAATTTGTGGCTAATCAGCTGAGTCACGATGAACATTTTTCCAATGTTGCTGAACAGATTAAGTTGCAAGCAAACGGATCTACAAAACCAGAAACTGGTCAGGAAATTGCTTCAACTTCCATCTCCAGTTGCTGGATTGACCTGTGA 1017 0.41 MNTYSHVPPGFRFHPTDEELVHYYLKKKVASKRIDIDVIKDVDLYKIEPWDLQELCKNGSHEQDEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYCKHCLTGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPQEEGWVVCRVFKKRMTTVRKMGDYVSPCWYDDQVSFMQELESPMRISNPNAPNRDLYPCKKELELQFNIPHDAFLQLPQLEGPIVPQSVASLSFSPFVSYGYGCKNNGNALQSSSLTQEHRQQQSLQFHYASNDQSMDNVMDWRVLDKFVANQLSHDEHFSNVAEQIKLQANGSTKPETGQEIASTSISSCWIDL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0631 338 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Pvu2g0631 338 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Pvu2g0631 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 307 - -
Pvu2g0631 338 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Pvu2g0631 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 307 - -
Pvu2g0631 338 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0631 Pvu-Chr2 6630531 6634110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0631 1 338 NAC Transcription Factor Family AT1G12260 55.172 7.52e-131 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu2g0631 NAM 5.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0631 - - gmx:100779370 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0631 2 6630531 6634110 Pvu3g2242 3 43378154 43384221 PCT