Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0626 ATGGGGAGACAGCCTTGCTGTGACAAACTTGGAGTGAAGAAAGGTCCATGGACTGCTGAGGAAGACAAAAAACTGATAAACTTCATTCTCACCAATGGCCAGTGCTGTTGGCGTGCTGTTCCCAAGCTTGCTGGCCTTCGTCGTTGTGGTAAGAGTTGTCGTCTTCGCTGGACTAATTATCTAAGGCCTGATTTGAAGAGAGGCCTCCTCACACAGGCAGAAGAACAGCTTGTTATTGATCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAGATTGCTGCCAGGTTACCAGGAAGAACAGACAACGAGATTAAAAATCACTGGAACACCCACATCAAGAAAAAGCTCCTTAAGATGGGTATCGATCCTGTTACTCATGAACCTCTCAACAAACAACTCTCATCCCATGATAGTTCTTCCCCTGCAGACCATTTGCCACAAGTTGATAACATCCATCAGGTTAAGGAAAATGGTGTGACTCTCAACTGGGAAGAGAATTCCACCTCATCACCAGCTGAAAATTCTTCTGGGGAAGAATCCCTTTTGATGAATAGCATTTGCAGTGATGTGTATTTAATGAACAGCATGTGGCTGGATGAAACCCCTCTTATGGACACATTATGGGACAGCACACCTAAATTAGAGAATGAAAATAATGGCATGGGCTTGCCAATGTGGGAGGATAACTGTCCTTGGTTGTTGGACTGCCAGGACTTTGGTATTCATGATTTTGGTTTTAATTGTTTCAGCCAGATTGAATCAAATGCACTGCAAACTACAGACATGGACAGAAAAGGGCTTTAG 804 0.4453 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTQAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPLNKQLSSHDSSSPADHLPQVDNIHQVKENGVTLNWEENSTSSPAENSSGEESLLMNSICSDVYLMNSMWLDETPLMDTLWDSTPKLENENNGMGLPMWEDNCPWLLDCQDFGIHDFGFNCFSQIESNALQTTDMDRKGL* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0626 267 Gene3D - 12 67 - -
Pvu2g0626 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pvu2g0626 267 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pvu2g0626 267 CDD SANT 16 61 IPR001005 -
Pvu2g0626 267 PANTHER MYB TRANSCRIPTION FACTOR-RELATED 1 241 - -
Pvu2g0626 267 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pvu2g0626 267 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Pvu2g0626 267 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pvu2g0626 267 SMART sant 13 63 IPR001005 -
Pvu2g0626 267 SMART sant 66 114 IPR001005 -
Pvu2g0626 267 Gene3D - 70 142 - -
Pvu2g0626 267 CDD SANT 71 112 IPR001005 -
Pvu2g0626 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pvu2g0626 267 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pvu2g0626 267 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0626 Pvu-Chr2 6523807 6526099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0626 1 263 MYB Transcription Factor Family AT4G12350 54.639 3.82e-99 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu2g0626 Myb_DNA-binding 2.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0626 K09422 - gmx:100800360 501.13