LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g0617	ATGTCGCGGATCTTCCTTACTACTCTTTCTCTACTGCTCTTGCTCCTTGCTCCTTACGCGGCTGGTGAAGGACTTAAGTACAAAAATTCTGAATTTCATAATCTGTTTCCATTTCTGGGTCGTGATGAAGATTCGAACACGGAGATAACTGGTGATACGCCCGAGGACAGAAAAGAATTCAATGATCGATTACCCTACTCAATGCCTAAAAATGCTGTCCAGTCTACCAGCAAACTCGGTCAAGGATTCTACGACCAGAGTTGCCCCGATGTAGAAAATATCATCTCCAAAGCGTTCGCCCAAATCCTTAAGGATAATCCAGGTGCAATCGCTCACGTCATTCGCCTTCAATTCCATGACTGCTTCGTCAATGGATGCGATGCATCGATCTTGTTAGATTTTACACCATCGGGTGACAATGTGGAGAAAAGTTCATCGTTCAATGGTCTACTCCTGAAAGGGGCTGACCTGATGGATGACATTAAGGGAAAGGTGGAGGAGAAATGTCCTGGAATCGTGTCATGTGCTGACGTAATGACATTCAGTACCTACGAAGCAATGGCAATGGCGGGTTTACCTCGTAAGAGGGCCGTGGCTGGTCGTAAAGACTCTATTATTTCCCTTGCAAGCATTGCAGAATCCAACAATCTTCCTCTGCCAGACTGGACCATCGACCAAATGATGGAACTCTTTGGCAGGAAAGGGTTCAACATAGAAGAAATGGTGGTGTTGTTGGGTGCACATTCTCTTGGCAAGGCTCATTGTGACTTCTTCATGCAGAGGGCCTTCAACTTCAATGGGACTGGGAAGCCTGACCCTCTCCTCCCTAAGGATGTGGTTGATGAATTCCAAAAAGCATGTCCTAACGGTGGCACAGCCCTGTTCAGGAACCCCCCAGTAGCCTTTGATTCCACTCCAACTGTTCTTGATAACCTCTTCTACCAGGAAATGATTCAAAAGAATAGAACGTTGCTCCCTAGCGATTCACATCTCCATGAAGATCCCAGAACTAAGCCAACTGTTGAACAGATGGCAAACGACCATGCCTTGTTCAACAAGAGGTTTCATGATGTCATGTACAAGCTCACTTCTTTGAATGTTCTCACAGGGACTGAAGGGGAGGTCAGGAAAATCTGCAGGTCCACCAACTAA	1152	0.4618	MSRIFLTTLSLLLLLLAPYAAGEGLKYKNSEFHNLFPFLGRDEDSNTEITGDTPEDRKEFNDRLPYSMPKNAVQSTSKLGQGFYDQSCPDVENIISKAFAQILKDNPGAIAHVIRLQFHDCFVNGCDASILLDFTPSGDNVEKSSSFNGLLLKGADLMDDIKGKVEEKCPGIVSCADVMTFSTYEAMAMAGLPRKRAVAGRKDSIISLASIAESNNLPLPDWTIDQMMELFGRKGFNIEEMVVLLGAHSLGKAHCDFFMQRAFNFNGTGKPDPLLPKDVVDEFQKACPNGGTALFRNPPVAFDSTPTVLDNLFYQEMIQKNRTLLPSDSHLHEDPRTKPTVEQMANDHALFNKRFHDVMYKLTSLNVLTGTEGEVRKICRSTN*	384

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu2g0617	383	PANTHER	PEROXIDASE 25-RELATED	56	381	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pvu2g0617	383	Gene3D	-	82	383	-	-
	Pvu2g0617	383	Pfam	Peroxidase	98	347	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pvu2g0617	383	Gene3D	Peroxidase, domain 2	218	362	-	-
	Pvu2g0617	383	PRINTS	Plant peroxidase signature	88	107	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pvu2g0617	383	PRINTS	Plant peroxidase signature	112	132	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pvu2g0617	383	PRINTS	Plant peroxidase signature	153	166	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pvu2g0617	383	PRINTS	Plant peroxidase signature	172	182	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pvu2g0617	383	PRINTS	Plant peroxidase signature	191	206	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pvu2g0617	383	PRINTS	Plant peroxidase signature	239	251	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g0617	Pvu-Chr2	6423286	6424951	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu2g0617	77	383	Peroxidase	AT5G17820	39.103	7.97e-70	222

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g0617	K00430		-	gmx:100802856	450.669

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