Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0586 ATGGTAGAGAAGAAGAAAAATGAAGCAGACGAAGCAAAGAAGAAGAAGAAGAAGAAGAAAAGAGAGAGTGAGAAGAAGCACTATCGTGGGGTACGCATGCGTCAATGGGGGAAATGGGTATCAGAAATAAGAGAACCCAAAAAAAAGTCCAGAATCTGGCTCGGAACATTTCCCACGCCAGAAATGGCGGCTCGAGCCCACGATGTGGCGGCGCTCACCATCAAAGGCACTTCCGCTTTCCTTAATTTCCCCGAACTAGCCTCACACCTTCCGCGCCCGCCCACCACTTCTCCTAAGGATATCCAAGCCGCCGCCGCCGAAGCTGCTGCACTCAACTGTGAGGCCCAGCCTCTGGTCCAGGCCCAAGCCCAAGCCCAGATTAGGGCCTCCTCGTTGAACGATGGGGATGACGCGTTCTTGGACCTCCCTGATCTTTTAGCTGACTCAAGTCAGAGTGCAGGTGGCTTTGGTTACTCTGCGTTGTGGCTCGTAGCCGCACCTGAACATCTAAACTCGGCTTTTCCGCTCCATGACCCTCCTTTTCTCTGGGACTCTTCGCTTTAA 564 0.5301 MVEKKKNEADEAKKKKKKKKRESEKKHYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAALTIKGTSAFLNFPELASHLPRPPTTSPKDIQAAAAEAAALNCEAQPLVQAQAQAQIRASSLNDGDDAFLDLPDLLADSSQSAGGFGYSALWLVAAPEHLNSAFPLHDPPFLWDSSL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0586 187 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Pvu2g0586 187 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Pvu2g0586 187 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 11 153 - -
Pvu2g0586 187 SUPERFAMILY DNA-binding domain 27 85 IPR016177 GO:0003677
Pvu2g0586 187 MobiDBLite consensus disorder prediction 1 30 - -
Pvu2g0586 187 MobiDBLite consensus disorder prediction 11 30 - -
Pvu2g0586 187 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 153 - -
Pvu2g0586 187 Coils Coil 2 26 - -
Pvu2g0586 187 Pfam AP2 domain 27 76 IPR001471 GO:0003700|GO:0006355
Pvu2g0586 187 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Pvu2g0586 187 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Pvu2g0586 187 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Pvu2g0586 187 CDD AP2 27 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0586 Pvu-Chr2 5810982 5811876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0586 11 182 AP2-EREBP Transcription Factor Family AT4G16750 55.233 1.82e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu2g0586 AP2 1.2e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0586 2 5810982 5811876 Pvu3g2292 3 44044998 44045690 PCT