Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0575 ATGTACGAAGAAACTACCTACGACTCCGATTTGGCTCTTTTGGATTCCATTCGCCGCCACTTACTCGGGGACTTCGAGGATCTCAAATTCGGAGCCCCGATTGTTAACTCCGGTAACACTCCCCTTTACTCTCGGAGCACCAGTTTCAGTAGGTTGTACCCGTGTTTGAGTGACGATTGGGGAGAGCTTCCTCTTAAGGAAGATGATTCAGAGGACATGGTGCTCTGCGGTGTTCTTCGCGATGCCATCAACGTAGGCTGGGTCCCATCTCTCAACGCAGCCTCACCGAACACCTTTTCCTCGGGTTTCATCCCGGAAGTTACCGTGAAACCCGAACCGGATTTATTTCCGGCACCGGAACCTGTTTTCACCGCTTCGGTGGTTCAGAAGGATGCACCGGCGGTTGTTCCGGCCAAGGGGAAGCACTACCGCGGCGTGAGGCAACGGCCGTGGGGAAAATTCGCGGCGGAGATCCGCGACCCGGCTAAAAACGGGGCTCGGGTCTGGCTCGGAACGTTCGAGACGGCTGAGGACGCCGCCCTGGCATACGATAGAGCCGCGTATCGAATGCGCGGCTCGCGGGCTTTGTTGAATTTCCCGCTTCGGATTAATTCGGGCGAGCCCGAACCGGTTCGGGTGACGTCGAAGCGAGCGTCGCCGGAGCCTTCGTCCTCGTCGGAGAGTGGATCGTCGGCGAAGCGGCGGAAAAAAGTGGTGGGGTCGACGGTGACGGCTCCAAGTGGATTGAGAACGGGGCAAGTGGGAAGTCAAGTGTCTCAGTGCACACGTGCGGAACAGTTGTTGGTTAACTAA 813 0.5732 MYEETTYDSDLALLDSIRRHLLGDFEDLKFGAPIVNSGNTPLYSRSTSFSRLYPCLSDDWGELPLKEDDSEDMVLCGVLRDAINVGWVPSLNAASPNTFSSGFIPEVTVKPEPDLFPAPEPVFTASVVQKDAPAVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRVTSKRASPEPSSSSESGSSAKRRKKVVGSTVTAPSGLRTGQVGSQVSQCTRAEQLLVN* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0575 270 ProSiteProfiles AP2/ERF domain profile. 142 200 IPR001471 GO:0003700|GO:0006355
Pvu2g0575 270 MobiDBLite consensus disorder prediction 207 261 - -
Pvu2g0575 270 PANTHER BNAANNG21280D PROTEIN 26 244 - -
Pvu2g0575 270 SUPERFAMILY DNA-binding domain 142 202 IPR016177 GO:0003677
Pvu2g0575 270 CDD AP2 141 200 IPR001471 GO:0003700|GO:0006355
Pvu2g0575 270 Gene3D AP2/ERF domain 141 203 IPR036955 GO:0003700|GO:0006355
Pvu2g0575 270 PRINTS Ethylene responsive element binding protein signature 143 154 IPR001471 GO:0003700|GO:0006355
Pvu2g0575 270 PRINTS Ethylene responsive element binding protein signature 166 182 IPR001471 GO:0003700|GO:0006355
Pvu2g0575 270 MobiDBLite consensus disorder prediction 244 261 - -
Pvu2g0575 270 Pfam AP2 domain 142 192 IPR001471 GO:0003700|GO:0006355
Pvu2g0575 270 PANTHER DNA-BINDING DOMAIN 26 244 IPR044808 GO:0003700|GO:0009873
Pvu2g0575 270 SMART rav1_2 142 206 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0575 Pvu-Chr2 5668036 5669347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0575 9 269 AP2-EREBP Transcription Factor Family AT4G17500 55.311 4.64e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pvu2g0575 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0575 K09286 - gmx:100819649 384.8