LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g0574	ATGGCTTCCTTAACCCTCCTTATACCAACACTTATCTGTCTTCAATTTCATCTTCTTTCTTTAGCTTTTGCAGACATTGATATTAGTTCCCAAATTTCCACCGATGACAATGATGTGTGGCGTTCTCCATCAGGTCATTTTGCCTTTGGGTTTCGCTCATTGGATAATAACACTGATCTCAATAAGAACCTGTTCATGCTTGCCATATGGTACGACATGATACCCGACAAGACCGTTGTTTGGAGTGCAAAAACAGACAACAAACTTGCAACAGCACCAACGGGATCACATGTTCGGATCACATCAGCGGGGCTAACACTGGCAGGTCCCAAAGGAGATTCCATATGGACATCAAACTTGGAAGGTGTTATTGTCTCCGTAGGATCTATGCTTGACACTGGCAACTTTGTTCTACTCAATCAGAACTCTGAAAAGCTGTGGCAAAGCTTTGAGAACCCCACAGACACGTTGTTGCCTAACCAATCTCTCCAACTCGGAGGCATGCTAACTTCTCGATTGACAGACACCAATTACACAAGTGGAAGGTTCCAACTTTATTTCAAGGATGGTAATGTGTTACTGAGTCCTCTTGCATGGCCTTCTCCACTGAAATACAACTCTTATTATGTGTTGGATGCCTCTGGTGCTGCTTCAACATTAGTGTTCAATGAGTCTGGGGATATCTATGTAAACACCACAAATGGGACTACAATCCAACCTCAAGGTTCGCAATGGAATAGCTCCGATCTCGATCCTGAGGTGAATTACTACAGAGCAACGCTTGACTTCAGTGGAGTTTTCACGCAGTATTATCATCCACGGAACAGCGCTGCTCAACCAGGGTGGAGAATCATGAGGTATGTTCCCGACAACATTTGCAATGCAATATCTTATCAGTATGGTAGCGGTTCCTGTGGCTATAATAGCTACTGCTCCATGGAAAATCATAGGCCTACCTGCAAATGCCCTTATGGGTATTCGCTGTTGGATCCAAGTAAACAATTTGGTGGATGCCAACCCAATTTCACCCTCGCTTGTGGAGCCGATGTTCAAACACCGCCAGAGGAACTATATGAAATGCATGCCGCTCAAGATTTTAATTTTCCAGAGGGGGATTATGAAAGGATACAACCTTACTCTAGCCAGGAATGCCAGCAATTTTGCTTGCAAGATTGCATGTGTGCTATGGTCGTTTCAGGAGGCGACACTTGTTGGCTGAAGAGATTTCCCCTTGGTAACGGTAGAGAAGAACCAGTCCATGATCTACATTTTGTCTATATCAAAACAAGAATTATTCGTGACTTTTATCCAGACGAGGAACTTTCCCCTGCTCCGGATTCAAAGAAAGAATACAACGGTAAGTTGTTTCTTTTGGGTCCCCTACTTGGTTCTCTTGTCCTCAACAGTATTCTCATTGCTACAGTTGCTTTGTTTGTTCTCATGAAGAAAAAGGCGAATAGGGTTTCCACAGCTGCCATTAGTCCTTTGGAAACAAATTTGCATTCATTTACTTATGAAAAATTGGAAAAGGCGACACAGAATTTTAAGGAGGAAATAGGTAGAGGTTCTTATGGCCTTGTTTACAAAGGGCAACTAGAAGCAGGTTCTTGTCATCTGGTTGCTGTGAAGAGATTGGACAGATTGGCACAAGAACGAGAGAAAGAATTTAGGACTGAATTGAGTTCCATTGGTAGAACCTGCCACAAAAATCTGGTCAGGTTGATTGGATTTTGTGACGAGGGAATGAATAGAATATTGGTGTACGAGTTCATGAGCAATGGTAATCTTGCAGACATCCTGTTTGGACAACCCAAGCCCAAATGGAATGTAAGGGTTGGATTTGCTCTGGGGATCGCAAGAGGGTTGGTGTACTTGCACGAAGAGTGTGACACTCCTATTATTCATTGTGATATAAAACCTCAAAATATACTGATAGATGAGTATTTGAATCCAAAGATATCTGACTTTGGGCTGGCCAAGTTGTTGTTGTCTGACCAAAGTAGAACCACCACTATGATCCGAGGAACCCGAGGATATGTGGCTCCTGAATGGTTCAAGAATGTTGCTGTGACGGTTAAAGTGGATGTTTACAGCTTTGGGGTAATGTTGTTGGAAATAATTTGCAGCAGAAGAAGTGTGTTGATGATGGAGCCAGGGGAAGAAGAGAAGGCATTGCTGACAGATTGGGCTTGTGATTGCTTTATGGAAGGGAAAACAGATGTTCTGGTGGAGAATGATGAAGAGGCCTTATCTGACTATGTGAGGCTACAAAAATGGATAAAAATAGCAATATGGTGCATTCATGAGCAACCTGAAATGAGACCAACAATGGGGATGGTCATGCAAATGTTAGAAGGCTTTGTTGAAGTCCCTAACCCACCATCTCCTTTTCTCATACGTTCCATGCCTTAA	2412	0.4291	MASLTLLIPTLICLQFHLLSLAFADIDISSQISTDDNDVWRSPSGHFAFGFRSLDNNTDLNKNLFMLAIWYDMIPDKTVVWSAKTDNKLATAPTGSHVRITSAGLTLAGPKGDSIWTSNLEGVIVSVGSMLDTGNFVLLNQNSEKLWQSFENPTDTLLPNQSLQLGGMLTSRLTDTNYTSGRFQLYFKDGNVLLSPLAWPSPLKYNSYYVLDASGAASTLVFNESGDIYVNTTNGTTIQPQGSQWNSSDLDPEVNYYRATLDFSGVFTQYYHPRNSAAQPGWRIMRYVPDNICNAISYQYGSGSCGYNSYCSMENHRPTCKCPYGYSLLDPSKQFGGCQPNFTLACGADVQTPPEELYEMHAAQDFNFPEGDYERIQPYSSQECQQFCLQDCMCAMVVSGGDTCWLKRFPLGNGREEPVHDLHFVYIKTRIIRDFYPDEELSPAPDSKKEYNGKLFLLGPLLGSLVLNSILIATVALFVLMKKKANRVSTAAISPLETNLHSFTYEKLEKATQNFKEEIGRGSYGLVYKGQLEAGSCHLVAVKRLDRLAQEREKEFRTELSSIGRTCHKNLVRLIGFCDEGMNRILVYEFMSNGNLADILFGQPKPKWNVRVGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEYLNPKISDFGLAKLLLSDQSRTTTMIRGTRGYVAPEWFKNVAVTVKVDVYSFGVMLLEIICSRRSVLMMEPGEEEKALLTDWACDCFMEGKTDVLVENDEEALSDYVRLQKWIKIAIWCIHEQPEMRPTMGMVMQMLEGFVEVPNPPSPFLIRSMP*	804

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu2g0574	803	ProSiteProfiles	Bulb-type lectin domain profile.	25	151	IPR001480	-
	Pvu2g0574	803	Gene3D	Phosphorylase Kinase; domain 1	476	590	-	-
	Pvu2g0574	803	Gene3D	-	24	151	IPR036426	-
	Pvu2g0574	803	Gene3D	Transferase(Phosphotransferase) domain 1	591	789	-	-
	Pvu2g0574	803	SMART	serkin_6	513	788	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu2g0574	803	CDD	STKc_IRAK	519	787	-	-
	Pvu2g0574	803	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	12	800	-	-
	Pvu2g0574	803	PANTHER	MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN	12	800	-	-
	Pvu2g0574	803	Gene3D	-	152	278	IPR036426	-
	Pvu2g0574	803	ProSitePatterns	Protein kinases ATP-binding region signature.	519	543	IPR017441	GO:0005524
	Pvu2g0574	803	SUPERFAMILY	alpha-D-mannose-specific plant lectins	79	171	IPR036426	-
	Pvu2g0574	803	Pfam	Protein kinase domain	515	782	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu2g0574	803	Pfam	D-mannose binding lectin	78	165	IPR001480	-
	Pvu2g0574	803	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	633	645	IPR008271	GO:0004672\|GO:0006468
	Pvu2g0574	803	SUPERFAMILY	Protein kinase-like (PK-like)	490	785	IPR011009	-
	Pvu2g0574	803	ProSiteProfiles	Protein kinase domain profile.	513	798	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu2g0574	803	SMART	blect_4	30	153	IPR001480	-
	Pvu2g0574	803	PIRSF	SRK	1	802	IPR024171	GO:0004674

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g0574	Pvu-Chr2	5633727	5636138	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu2g0574	499	786	Receptor kinase-like Gene Family	AT1G60800	43.051	1.76e-68	235

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Pvu2g0574		Pkinase	8.1e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g0574	-		-	vra:106755039	1253.04