Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0538 AGCATGGGGCACTCCAATGTGTGGAACTCTCATCCCAAGAGCTATGGACCTGGTTCTCGCACCTGCCGAGTCTGTGGGAACCCTCATGGGTTGATTAGGAAGTATGGGCTTATGTGCTGCAGGCAGTGTTTCCGCAGCAATGCGAAGGAAATTGGCTTCATTAAGTGTTTATCGTCCCCAACCGTTTTGGAGTCTGCCATTAGTGATGTTATTGTGGGGATGATTTCATTGTTTGAAGAATTTTAA 246 0.4715 SMGHSNVWNSHPKSYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKCLSSPTVLESAISDVIVGMISLFEEF* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0538 81 Pfam Ribosomal protein S14p/S29e 8 55 IPR001209 GO:0003735|GO:0005840|GO:0006412
Pvu2g0538 81 PANTHER 40S RIBOSOMAL PROTEIN S29 2 55 - -
Pvu2g0538 81 PANTHER 40S RIBOSOMAL PROTEIN S29 2 55 IPR039744 GO:0003735|GO:0008270
Pvu2g0538 81 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 50 - -
Pvu2g0538 81 Gene3D 30s Ribosomal Protein S14; Chain N 2 56 IPR043140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0538 Pvu-Chr2 4800659 4801964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0538 2 55 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.593 1.18e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0538 K02980 - pvy:116132744 125.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0538 2 4800659 4801964 Pvu7g0447 7 3487477 3488815 PCT