Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0520 ATGATTGGCCATACCATTGCTATCCATAATGGAAAAGAACATTTACCTATTTATATAACAGATCGTATGGTAGGCCATAAATTAGGAGAATTTTCACCTACTCTAAACTTCCGAGGACATGCGAAAAATGATAATAGATCTCGTCGTTAA 150 0.3467 MIGHTIAIHNGKEHLPIYITDRMVGHKLGEFSPTLNFRGHAKNDNRSRR* 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0520 49 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 1 49 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pvu2g0520 49 PANTHER 37S RIBOSOMAL PROTEIN S19, MITOCHONDRIAL 1 49 - -
Pvu2g0520 49 Pfam Ribosomal protein S19 1 40 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pvu2g0520 49 PRINTS Ribosomal protein S19 family signature 10 22 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pvu2g0520 49 PRINTS Ribosomal protein S19 family signature 22 37 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pvu2g0520 49 Gene3D 30s Ribosomal Protein S19; Chain A 1 49 IPR023575 GO:0003735|GO:0005840|GO:0006412
Pvu2g0520 49 SUPERFAMILY Ribosomal protein S19 1 42 IPR023575 GO:0003735|GO:0005840|GO:0006412
Pvu2g0520 49 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 1 49 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pvu2g0520 49 ProSitePatterns Ribosomal protein S19 signature. 10 34 IPR020934 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0520 Pvu-Chr2 4694257 4694670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0520 1 35 Cytoplasmic Ribosomal Protein Gene Family AT5G63070 48.571 8.70e-06 38.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0520 K02965 - gmx:3989336 107.071