Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0510 ATGTTCTTGTACTATACACATGTTAGATTATCACATCTACTATATATATCTTCTCAACATGAGGCACAAGTATCTCCCAAAAGTCAAGGAGACTCAACACAAACTGCAAAACGAGTGATGAGAGGTGAGAGAGAAATGGTTACAGACGTATCCATGGCTTCCCTCAAGCTTCTGCTGCTGTTGTTCATTCTCAGCTTCCTCCACTTCAACACTTGCAAAGCACAGGAACTGAACTCCGACCCCGTCTACCTGTACCATAACTGTTCAGGCGGCAACACCACCGCCAACAGTGCCTACCAACTAAACCTCGGCACCCTCCTCACTTCCCTATCTTCCAACGCCTCCACAGAATTCTCCAACAACACTGTCGGAACATCCTCGTCCGACAGGGTGTACGGACTGTTCATGTGCAGGGGAGACGTGCCCTCTACGCTTTGTCACCAGTGCGTGTTGAACGCAACGCGACGTCTCCGCTCGGATTGCTCTCTGGCCAAACAGGCCGTCATATGGTACGACGAGTGCACGGTTCGCTACTCGAACATCTCTTTCTTCTCCACGGTGGCCACTCGGCCGCGTGTCGGACTCCTCAACACCGGCAACATATCCAACCCAGAAGCCTTCATGACCCTGCTTTTCTCAACCATTAACACAACCGCGGATGAGGCTGCCAACTTTCACATGGGTGTGAAGAAATACGCGACGAATCAGGCCAACTTTTCTGGGTTTCAGACTCTGTACTGTTTGGCTCAGTGCACACCCGATCTGTCCCCAGGAGACTGCAGAAATTGTCTCAGTGGTGTGATTGGAGACCTTCCATGGTGCTGCCAGGGAAAGCAGGGAGGAAGGGTTCTCTATCCTAGCTGCAATGTTAGGTACGAACTCTACCCTTTCTACCGCGCCACAGCCACGCCTTCACCTTCACCTTCACCCTCACCGCCCCTACTTCCTCCTCCAACTTCCGGTAATTCCCGAGGAGGCGGTGGGATCTCAGCTGGGACCATTGTTGCGATTGTGGTTCCAATTTCTGTCGCCGTGCTTCTATTTATAGTGGGAATTTGTTTCTTGAGTAGAAGAGCCAGGAAGAAGGCTTCTGCAAAGGAAGGAAAAAATGTAGATGACATCACCACTTTGGAATCCTTGCAATTCGGTTTCGGCACGATTGAAGCCGCCACAAACAATTTCTCAGCGGACAACAAGCTGGGGGAGGGTGGATTTGGTGAGGTTTTCAAGGGCACTCTTCCGAGTGGACAAGTAATAGCTGTGAAGAGACTCTCGAAAAGCTCTGGGCAAGGTGGAGAAGAATTTAAGAATGAAGTGGTGGTGGTTGCCAAGCTCCAACATAGAAATTTAGTGAGGCTTCTCGGGTTTTGCTTGCAAGGAGAAGAGAAGATACTTGTCTATGAATATGTTCCCAACAAAAGTCTCGACTACACTCTCTTTGACCCTGAAAAGCAAAGTGAGTTGGATTGGAGGAGACGTTACAAGATTATTCAAGGGACTGCTCGAGGCACTCAATATCTTCACGAAGATTCTAGACTTAGAATTATACATCGAGATCTTAAAGCAAGTAATATATTGTTAGATGGGGATATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAACACCGACAGAATTGTAGGGACTTATGGTTATATGGCTCCAGAATATGCAATGCATGGAGAGTTCTCTGTTAAGTCTGACGTGTACAGTTTTGGAGTCCTCCTTATGGAGATCATAAGCGGCAAGAAGAATAGTTCTTTCTATCAAACAGATGGTGCTGAGGATCTACTGAGCTATGCGTGGCTACTTTGGAAGGATGGAACACCCTTGGAACTGATGGACCCCATATTAAGAGAATCCTACAATCAGAATGAAATCATCAGAAGCATCCATATTGGTCTGCTCTGTGTCCAAGAAGATCCCGAAGACAGACCTACAATGGCAACAATAGTTCTTATGCTAGATAGTAACACTGTCACTCTACCAACTCCTAAGCGACCTGCATTTTTCATCCACAGTGGAACAGATGCAACCATGCCAAAAGGGCAGCAATTTGATCAGTCTATAACAAAATCATTACCAATGTCTATCAACGATGTTTCCATTAGCGAAATGGATCCTAGATAA 2160 0.4676 MFLYYTHVRLSHLLYISSQHEAQVSPKSQGDSTQTAKRVMRGEREMVTDVSMASLKLLLLLFILSFLHFNTCKAQELNSDPVYLYHNCSGGNTTANSAYQLNLGTLLTSLSSNASTEFSNNTVGTSSSDRVYGLFMCRGDVPSTLCHQCVLNATRRLRSDCSLAKQAVIWYDECTVRYSNISFFSTVATRPRVGLLNTGNISNPEAFMTLLFSTINTTADEAANFHMGVKKYATNQANFSGFQTLYCLAQCTPDLSPGDCRNCLSGVIGDLPWCCQGKQGGRVLYPSCNVRYELYPFYRATATPSPSPSPSPPLLPPPTSGNSRGGGGISAGTIVAIVVPISVAVLLFIVGICFLSRRARKKASAKEGKNVDDITTLESLQFGFGTIEAATNNFSADNKLGEGGFGEVFKGTLPSGQVIAVKRLSKSSGQGGEEFKNEVVVVAKLQHRNLVRLLGFCLQGEEKILVYEYVPNKSLDYTLFDPEKQSELDWRRRYKIIQGTARGTQYLHEDSRLRIIHRDLKASNILLDGDMNPKISDFGMARIFGVDQTQGNTDRIVGTYGYMAPEYAMHGEFSVKSDVYSFGVLLMEIISGKKNSSFYQTDGAEDLLSYAWLLWKDGTPLELMDPILRESYNQNEIIRSIHIGLLCVQEDPEDRPTMATIVLMLDSNTVTLPTPKRPAFFIHSGTDATMPKGQQFDQSITKSLPMSINDVSISEMDPR* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0510 719 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 53 717 - -
Pvu2g0510 719 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 53 717 - -
Pvu2g0510 719 CDD STKc_IRAK 400 666 - -
Pvu2g0510 719 Gene3D - 192 297 IPR038408 -
Pvu2g0510 719 Gene3D - 80 183 IPR038408 -
Pvu2g0510 719 ProSiteProfiles Protein kinase domain profile. 394 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0510 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Pvu2g0510 719 ProSiteProfiles Gnk2-homologous domain profile. 189 297 IPR002902 -
Pvu2g0510 719 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
Pvu2g0510 719 Pfam Salt stress response/antifungal 202 295 IPR002902 -
Pvu2g0510 719 Pfam Salt stress response/antifungal 88 180 IPR002902 -
Pvu2g0510 719 Gene3D Transferase(Phosphotransferase) domain 1 470 673 - -
Pvu2g0510 719 MobiDBLite consensus disorder prediction 303 319 - -
Pvu2g0510 719 MobiDBLite consensus disorder prediction 303 324 - -
Pvu2g0510 719 SMART serkin_6 394 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0510 719 ProSiteProfiles Gnk2-homologous domain profile. 81 183 IPR002902 -
Pvu2g0510 719 Pfam Protein tyrosine and serine/threonine kinase 396 663 IPR001245 GO:0004672|GO:0006468
Pvu2g0510 719 Gene3D Phosphorylase Kinase; domain 1 355 469 - -
Pvu2g0510 719 SUPERFAMILY Protein kinase-like (PK-like) 380 685 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0510 Pvu-Chr2 4617086 4620529 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0510 75 719 Receptor kinase-like Gene Family AT4G05200 56.535 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu2g0510 PK_Tyr_Ser-Thr 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0510 - - pvu:PHAVU_002G049500g 1384.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0510 2 4617086 4620529 Pvu7g0499 7 3931885 3934945 PCT
Pvu7g0525 7 4095820 4100284 Pvu2g0510 2 4617086 4620529 PCT