Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0509 ATGACCATGCTCAAACACACACCTTCAGCTCTGCTTTTGTTCATCGTATTTCTACTTACCTCGTCTCCCAATCGGGTTTCTGGAGAAGACCCTCTTGATATTTACTGTCCTAGTTCCAGTGAATTCCCTCTGTACAACCTCAACAGTTCATTCCATGACAACCTCAACCTTGTTCTGGGGTTGCTTTCCTCCACCAACGCTTCAACGGCTGGTTTCTACACCACGTCTAGAGGACAAGAGCCAAACAGGGTGTATGGACAATCGCTGTGCAGAGGGGACATCACCAACTCCACAGTTTGCAGAGAATGCATTGAGAAAGCAAGCCAGGAGATAATGAACAGTTGCAGGAGTGAAAATGCAATGATATGGTTCAACCTTTGCCAAGTGCGCTACTCCTTTCAGAGCTTTGATGTGGTGGCTTATACTGGAAAGTATCCGAAGCAGAACGATGAGGAGAAGAATGTCTCTGATCCTGTTCGATTCAGGGAATACTTGACTTTTCTAATGAACAATCTCTCATCCGAGGCTGCTTTCAATCTTGTCAGGAACATGTTTGCGGCTGGTGAAATTGAGTATCCTGGGAAGAAGACAATTTATGGGTTGGTCCAATGTACGAGGGACATGTCCCTCGAAGGCTGCAGTAGTTGTTTGAGTTCTGCCTTCACAGAAATCACTACATGCTGCTCCCACAGAGAAGGTGGGATTATTCTTAGTCGTACTTGCAATATCAGGTTCCAATTGTCTCAGTTCTTCAATGCTTCTTCTGCATATCTCTTGGTTTACCCAACTTCCACAGATGAAGAAATTAGTGAAAGAACGCTATTAGAAGAGCTGACTACACCTAAGCATGTAGCACTCACACGAGAAGGTGACTTGATTAGTTCTGAAGAAGTGTTGTTCATGACTTTAGCTTCCATTAAGGTTGCTACTGATGACTTTTCTGATACAAATAAGCTGGGACAAGGAGGGTTTGGTGCAGTGTACAAGGGTGTTCTACCAGATGGTAAAGAAATAGCAGTTAAAAGATTGTCGAGGAAATCTTGGCAAGGCATAGAGGAATTTAAAAATGAAGTTGTGTTGATTGCCAAACTTCAACACAAGAATTTGGTGAGGCTTGGATATATGGCTCCAGAGTATGCAATGGAAGGATTGTTCAGTGTGAAATCCGATGTGTTCAGCTTTGGCGTTGTCTTGCTTGAAATCATCAGCGGAAAAAGAAGCAATGGTTTTTACCAAACTGAACTTGCCCCGACACTGCTGGCATATGAAAAGGCAACCCCAACAGGGGATTCCAGGGATAACATTGTTCTGATGTTTGGGATTGGGATGGATGCAGGAGGCGGTGGGATCTCAGCTGGGACCATTGTTGCGATTGTGGTTCCAATTTCGGTCGCCGTGCTTCTATGTGTAGTGGGAATTTGTTTCTTGAGTAGAAGAGCCAGGAAGAAGCGGGGTTCTGTAAAGGAAGGAAAAAGTAAGGATCCACGAAAAAGATACTCATTTTTTCCTCTCTTTTTTCAAATGAATGATTTCATCTTACGCGTTTGTTTTGGGTTTCTAGACGTAGATGGCATCTCTACTGTGGAATCCTTGCAATTCGGTTTCGGCACGATTGAAGCCGCCACAAACAGTTTCTCAGCGGACAACAAGCTGGGGGAGGGTGGATTTGGTGAGGTTTTCAAGGGCACTCTTCCGAGTGGACAAGAAATAGCTGCCAAGAGACTCTCGAAAAGCTCTGGGCAAGGTGGAGAAGAATTTAAGAATGAAGTGGTGGTGGTTGCCAAGCTCCAACATAGAAACTTGGTGAGGCTTCTCGGGTTTTGCTTGCAAGGAGAAGAGAAGATACTTGTTTATGAATATGTTCCCAACAAAAGTCTCGACTACACTCTCTTTGACCCTGAAAAGCAAAGTGAGTTGGATTGGATGAGACGTTACAAGATTATTCAAGGGACTGCTCGAGGCATTCAATATCTTCACGAAGATTCTAGACTTAGAATTATACATAGAGATCTTAAAGCAAAATATGCAATGCAAGGAGAGTTCTCTGTTAAGTCTGATGTGTACAGTTTTGGAGTCCTCCTTATGGAGATCATAAGCGGCAAGAAGAACAGCTCTTTCTATCAAACAGATGGTGCTGAGGATCTACTGAGCTATGCGTGGCTACTTTGGAAGGATGGAACACCCTTGGAACTGATGGACCCCATGTTAAGAGAATCCTACAATGAGATTAAAATCATCAGAAGCATCCATATTGGTCTGCTCTGTGTCCAAGAAGATCCCGAATACAGACCTACAATGGCAACAATAGTTCTTATGCTAGCTAGTAACAGTGTTACTCTACCAACTCCTAAGCGGCCTGCATTTTTCATCCACAGTGGAACAGATGCAACCATGCCAAAAGGGCAGCAATTTGATCAGTCTATGACAAAATCATTACTAATGTCTATCAACGATGTTTCCATTAGCGAAATGGATCCTAGATAA 2484 0.4352 MTMLKHTPSALLLFIVFLLTSSPNRVSGEDPLDIYCPSSSEFPLYNLNSSFHDNLNLVLGLLSSTNASTAGFYTTSRGQEPNRVYGQSLCRGDITNSTVCRECIEKASQEIMNSCRSENAMIWFNLCQVRYSFQSFDVVAYTGKYPKQNDEEKNVSDPVRFREYLTFLMNNLSSEAAFNLVRNMFAAGEIEYPGKKTIYGLVQCTRDMSLEGCSSCLSSAFTEITTCCSHREGGIILSRTCNIRFQLSQFFNASSAYLLVYPTSTDEEISERTLLEELTTPKHVALTREGDLISSEEVLFMTLASIKVATDDFSDTNKLGQGGFGAVYKGVLPDGKEIAVKRLSRKSWQGIEEFKNEVVLIAKLQHKNLVRLGYMAPEYAMEGLFSVKSDVFSFGVVLLEIISGKRSNGFYQTELAPTLLAYEKATPTGDSRDNIVLMFGIGMDAGGGGISAGTIVAIVVPISVAVLLCVVGICFLSRRARKKRGSVKEGKSKDPRKRYSFFPLFFQMNDFILRVCFGFLDVDGISTVESLQFGFGTIEAATNSFSADNKLGEGGFGEVFKGTLPSGQEIAAKRLSKSSGQGGEEFKNEVVVVAKLQHRNLVRLLGFCLQGEEKILVYEYVPNKSLDYTLFDPEKQSELDWMRRYKIIQGTARGIQYLHEDSRLRIIHRDLKAKYAMQGEFSVKSDVYSFGVLLMEIISGKKNSSFYQTDGAEDLLSYAWLLWKDGTPLELMDPMLRESYNEIKIIRSIHIGLLCVQEDPEYRPTMATIVLMLASNSVTLPTPKRPAFFIHSGTDATMPKGQQFDQSMTKSLLMSINDVSISEMDPR* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0509 827 SUPERFAMILY Protein kinase-like (PK-like) 531 792 IPR011009 -
Pvu2g0509 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 373 422 - -
Pvu2g0509 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 268 372 - -
Pvu2g0509 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 674 811 - -
Pvu2g0509 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 266 - -
Pvu2g0509 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 458 673 - -
Pvu2g0509 827 Gene3D Transferase(Phosphotransferase) domain 1 621 673 - -
Pvu2g0509 827 Gene3D Transferase(Phosphotransferase) domain 1 674 780 - -
Pvu2g0509 827 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 674 811 - -
Pvu2g0509 827 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 14 266 - -
Pvu2g0509 827 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 458 673 - -
Pvu2g0509 827 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 268 372 - -
Pvu2g0509 827 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 373 422 - -
Pvu2g0509 827 ProSitePatterns Protein kinases ATP-binding region signature. 551 573 IPR017441 GO:0005524
Pvu2g0509 827 Pfam Protein kinase domain 314 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0509 827 Pfam Salt stress response/antifungal 40 133 IPR002902 -
Pvu2g0509 827 Pfam Salt stress response/antifungal 153 246 IPR002902 -
Pvu2g0509 827 ProSiteProfiles Protein kinase domain profile. 545 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0509 827 Pfam Protein tyrosine and serine/threonine kinase 678 771 IPR001245 GO:0004672|GO:0006468
Pvu2g0509 827 Pfam Protein tyrosine and serine/threonine kinase 547 674 IPR001245 GO:0004672|GO:0006468
Pvu2g0509 827 Pfam Protein tyrosine and serine/threonine kinase 373 406 IPR001245 GO:0004672|GO:0006468
Pvu2g0509 827 Gene3D - 35 136 IPR038408 -
Pvu2g0509 827 Gene3D - 144 250 IPR038408 -
Pvu2g0509 827 SUPERFAMILY Protein kinase-like (PK-like) 300 406 IPR011009 -
Pvu2g0509 827 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Pvu2g0509 827 Gene3D Transferase(Phosphotransferase) domain 1 376 435 - -
Pvu2g0509 827 Gene3D Phosphorylase Kinase; domain 1 279 375 - -
Pvu2g0509 827 Gene3D Phosphorylase Kinase; domain 1 522 620 - -
Pvu2g0509 827 ProSiteProfiles Gnk2-homologous domain profile. 30 136 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0509 Pvu-Chr2 4607178 4614656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0509 439 827 Receptor kinase-like Gene Family AT4G05200 48.506 2.76e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu2g0509 PK_Tyr_Ser-Thr 2.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0509 - - pvu:PHAVU_002G049400g 1609.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0509 2 4607178 4614656 Pvu7g0508 7 3999661 4002914 PCT