Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0508 ATGTATAAAGGTGAAGGTGTAGGAAGAATATACAGAGATAAATCAAGCAAAATATGGATGATTGCAGGAATTACAGTTGTGGTAGGCTTGATCATGGTATTTTTCATTTTCGGATTGTACCTTGTCAGGAATAAAAGACATCGACATGGTAAGAATGAAATAGACAATCATAAGATCAGTCTTAGATCTCTTCGAGTGGCTACCAATAACTTTTCTGATTTGAATAAGCTTGGACAAGGGGGATTTGGCCCTGTTTACAAGGGGAAACTTTGTGATGGCCAAGAAGTAGCAGTGAAGAGGTTGTCAGCTTGCTCAGAACAAGGCTCAGAGGAATTCATAAACGAGGTTCTTCTGATAATGAAACTTCAACACAAAAATCTTGTAAAGCTTCTTGGATTTTGTGTAGATGGAGAGGAGAAGCTTCTTGTGTATGAGTTTTTACCCAATGGTAGTCTTGATGTCGTACTCTTTGATTCTCGACTGAAAGTGATTCATAGAGACCTAAAAGCAAGTAATGTGTTGTTGGACCATAACATGAACGCAAAGATCTCAGACTTTGGAATGGCAAGGATATTTTCAGGAAATGAAGGTGAAGCTAACACTGCTACAATAGTTGGCACATATGGGTACATGGCTCCAGAGTATGCAATGGCGGGACTATATTCCATAAAATCTGATGTGTTTGGGTTTGGTGTGCTATTGCTTGAGATCATTACAGGGAAACGTAACGCGGGTTGCTATCACTCTAAAACCACTTCTAGCCTTCTATCATATGCGTGGAGTGTGTGGAATGAGGGAAAGGTGATAGAACTAAGTGATCCATTGTTGTGTGATTCATGCCCTGGAGATGAGTTTCTGAGATACATGCAGATTGGACTGCTATGTGTTCAAGAGGATGCATATGATAGGCCAACCATGTCTTCTGTTGTGATGATGCTGAAGAATGAAACAGCTACACTTGCCCATCCAGAAAAACCACCTTTCTCTGTAGGAAGATTCAATTCTAATGACCCAGATTCCCAGGAATGCTCACTCAATTTCTTAACCATGTCAGATATATTGCCCCAGTAA 1071 0.4015 MYKGEGVGRIYRDKSSKIWMIAGITVVVGLIMVFFIFGLYLVRNKRHRHGKNEIDNHKISLRSLRVATNNFSDLNKLGQGGFGPVYKGKLCDGQEVAVKRLSACSEQGSEEFINEVLLIMKLQHKNLVKLLGFCVDGEEKLLVYEFLPNGSLDVVLFDSRLKVIHRDLKASNVLLDHNMNAKISDFGMARIFSGNEGEANTATIVGTYGYMAPEYAMAGLYSIKSDVFGFGVLLLEIITGKRNAGCYHSKTTSSLLSYAWSVWNEGKVIELSDPLLCDSCPGDEFLRYMQIGLLCVQEDAYDRPTMSSVVMMLKNETATLAHPEKPPFSVGRFNSNDPDSQECSLNFLTMSDILPQ* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0508 356 Gene3D Transferase(Phosphotransferase) domain 1 149 325 - -
Pvu2g0508 356 SMART serkin_6 71 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0508 356 ProSiteProfiles Protein kinase domain profile. 71 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0508 356 PIRSF TyrPK_CSF1-R 288 329 - -
Pvu2g0508 356 PIRSF TyrPK_CSF1-R 75 161 - -
Pvu2g0508 356 PIRSF TyrPK_CSF1-R 11 46 - -
Pvu2g0508 356 PIRSF TyrPK_CSF1-R 153 242 - -
Pvu2g0508 356 Pfam Protein tyrosine and serine/threonine kinase 161 312 IPR001245 GO:0004672|GO:0006468
Pvu2g0508 356 Pfam Protein tyrosine and serine/threonine kinase 75 157 IPR001245 GO:0004672|GO:0006468
Pvu2g0508 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pvu2g0508 356 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 55 158 - -
Pvu2g0508 356 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 158 353 - -
Pvu2g0508 356 Gene3D Phosphorylase Kinase; domain 1 40 146 - -
Pvu2g0508 356 SUPERFAMILY Protein kinase-like (PK-like) 55 344 IPR011009 -
Pvu2g0508 356 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 158 353 - -
Pvu2g0508 356 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 55 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0508 Pvu-Chr2 4599844 4603583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0508 51 346 Receptor kinase-like Gene Family AT4G23150 47.853 3.48e-103 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu2g0508 PK_Tyr_Ser-Thr 8.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0508 - - pvu:PHAVU_002G049300g 719.153