Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0502 ATGGCTACCCAACAACAATCTCTGTTAGAGAAGCCCAAAAAACCCGTTTCCAAAACTATCTGCTTATTCCTTTCTGTGATTGCAGTTCTAAGTTCATCAGCCTTCATTGCTTCTTATCTCTTCAACAATTCCTCCCTTCACCATGTCTGTGATCAGGCACTTGATACTGCATCCTGCTTAACACATGTCTCAGAAGTAACCAAAACTCACACATTCACCACAACAGAACACCACAAACTCAATCTTCTCAAATCATTCCTCATGAAATACACCTCCCACATCGAGAAAGTCATGGACACAACCAGTGCCATCAAACTCAGGGTCAACAATCCAAGGGAGGAAGCAGCTTTGCGGGACTGTGCGGAGCTCATGGACTTGTCCTTGGACAGAGTTTGGAGCTCGATGTTAGCCGTAACAGAACAGAGCATTGAGTCGCGACAAGATGCACACACATGGCTAAGTAGCGTGCTAACGAACCATGCAACTTGCTTGGATGGATTAGAGGGTGCGTCTCGGAGTGTTATGGAGGGTGAAGTTGAGGACTTGATATCCAGGGCAAGAACCTCTCTAGCCATTCTTGTTGGCTCTGTTTTGCCTCCAAAGGTTGAAGAGATCATTGATGAACCCTTAAATGGGGAGTTTCCGTCATGGGTGAGCAGCAAGGATCGGAGGCTTTTGGAAAGTGGGGTTGGGGACATCAAGGCCAATGTCGTGGTGGCTAAGGATGGGAGTGGCAAGTTCAAGACTGTCACTGAGGCTGTGGCGTCTGCACCAGACAATGGTAAGACAAGGTACGTTATTTATGTGAAAAAGGGAACATATAAAGAAAATGTTGAAATTGGTAAGAAGAAGAAAAACGTCATGCTCGTGGGTGACGGTATGGATGCAACTATAATCACCGGAAGCTTGAACTTCATCGACGGAACAACAACCTTTAACAGCGCCACAGTTGCTGCTGTGGGTGATGGGTTTATAGGTCAAGACATATGGTTTCAGAACACGGCGGGACCGGAGAAACACCAAGCGGTGGCTCTGCGCGTAGGCGCCGACCAATCCGTGATAAACCGTTGTCGCATAGATGCCTTTCAAGACACTCTCTACGCACACTCCAACAGGCAGTTCTACAGAGACTCTTTCATCACCGGCACCGTTGACTTCATTTTCGGAAACGCCGCCGTCGTCTTCCAGAAGTGCAACTTGGTGGCCCGAAAGCCCATGAGTAACCAAAAAAACATGGTGACGGCTCAAGGAAGAGAAGATCCAAACCAAAACACAGGAACTTCAATTCAACAGTGTAACCTAACACCCAGCTCAGATCTTAAGCCTGTTGTGGGTTCCATCAAAACTTTTCTGGGTCGACCATGGAAGAAGTACTCCAGAACTGTGGTGATGCAGTCGACAATAGATAACCATGTTGATCCAACGGGATGGGCAGAGTGGGATGCTCAGAGTAAGGACTTTTTGCAAACGTTGTATTATGGAGAGTACATGAACAGTGGAGCTGGTGCTGGAACGAGCAAGAGAGTGACTTGGCCTGGTTATCATGTAATCAAAACTGCAGCAGAAGCCAGCAAGTTCACTGTAACACAGCTCATCCAAGGAAATGTTTGGTTGAAGAACACCGGTGTCAACTTCATTGAAGGCCTCTAA 1650 0.4709 MATQQQSLLEKPKKPVSKTICLFLSVIAVLSSSAFIASYLFNNSSLHHVCDQALDTASCLTHVSEVTKTHTFTTTEHHKLNLLKSFLMKYTSHIEKVMDTTSAIKLRVNNPREEAALRDCAELMDLSLDRVWSSMLAVTEQSIESRQDAHTWLSSVLTNHATCLDGLEGASRSVMEGEVEDLISRARTSLAILVGSVLPPKVEEIIDEPLNGEFPSWVSSKDRRLLESGVGDIKANVVVAKDGSGKFKTVTEAVASAPDNGKTRYVIYVKKGTYKENVEIGKKKKNVMLVGDGMDATIITGSLNFIDGTTTFNSATVAAVGDGFIGQDIWFQNTAGPEKHQAVALRVGADQSVINRCRIDAFQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVVFQKCNLVARKPMSNQKNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGSIKTFLGRPWKKYSRTVVMQSTIDNHVDPTGWAEWDAQSKDFLQTLYYGEYMNSGAGAGTSKRVTWPGYHVIKTAAEASKFTVTQLIQGNVWLKNTGVNFIEGL* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0502 549 TIGRFAM PME_inhib: pectinesterase inhibitor domain 22 182 IPR006501 GO:0004857
Pvu2g0502 549 CDD PMEI-like_4 54 194 - -
Pvu2g0502 549 SUPERFAMILY Pectin lyase-like 234 548 IPR011050 -
Pvu2g0502 549 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 194 IPR035513 -
Pvu2g0502 549 Pfam Plant invertase/pectin methylesterase inhibitor 45 191 IPR006501 GO:0004857
Pvu2g0502 549 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 192 IPR035513 -
Pvu2g0502 549 ProSitePatterns Pectinesterase signature 2. 380 389 IPR033131 -
Pvu2g0502 549 PANTHER PECTINESTERASE 26 547 - -
Pvu2g0502 549 Pfam Pectinesterase 236 535 IPR000070 GO:0030599|GO:0042545
Pvu2g0502 549 ProSitePatterns Pectinesterase signature 1. 261 280 IPR018040 -
Pvu2g0502 549 SMART PMEI_2 41 192 IPR006501 GO:0004857
Pvu2g0502 549 PANTHER PECTINESTERASE 26 547 - -
Pvu2g0502 549 Gene3D - 230 549 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0502 Pvu-Chr2 4549475 4551542 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0502 1 549 Carbohydrate Esterase AT1G11580 58.584 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0502 K01051 - gmx:100815836 926.776