LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g0502	ATGGCTACCCAACAACAATCTCTGTTAGAGAAGCCCAAAAAACCCGTTTCCAAAACTATCTGCTTATTCCTTTCTGTGATTGCAGTTCTAAGTTCATCAGCCTTCATTGCTTCTTATCTCTTCAACAATTCCTCCCTTCACCATGTCTGTGATCAGGCACTTGATACTGCATCCTGCTTAACACATGTCTCAGAAGTAACCAAAACTCACACATTCACCACAACAGAACACCACAAACTCAATCTTCTCAAATCATTCCTCATGAAATACACCTCCCACATCGAGAAAGTCATGGACACAACCAGTGCCATCAAACTCAGGGTCAACAATCCAAGGGAGGAAGCAGCTTTGCGGGACTGTGCGGAGCTCATGGACTTGTCCTTGGACAGAGTTTGGAGCTCGATGTTAGCCGTAACAGAACAGAGCATTGAGTCGCGACAAGATGCACACACATGGCTAAGTAGCGTGCTAACGAACCATGCAACTTGCTTGGATGGATTAGAGGGTGCGTCTCGGAGTGTTATGGAGGGTGAAGTTGAGGACTTGATATCCAGGGCAAGAACCTCTCTAGCCATTCTTGTTGGCTCTGTTTTGCCTCCAAAGGTTGAAGAGATCATTGATGAACCCTTAAATGGGGAGTTTCCGTCATGGGTGAGCAGCAAGGATCGGAGGCTTTTGGAAAGTGGGGTTGGGGACATCAAGGCCAATGTCGTGGTGGCTAAGGATGGGAGTGGCAAGTTCAAGACTGTCACTGAGGCTGTGGCGTCTGCACCAGACAATGGTAAGACAAGGTACGTTATTTATGTGAAAAAGGGAACATATAAAGAAAATGTTGAAATTGGTAAGAAGAAGAAAAACGTCATGCTCGTGGGTGACGGTATGGATGCAACTATAATCACCGGAAGCTTGAACTTCATCGACGGAACAACAACCTTTAACAGCGCCACAGTTGCTGCTGTGGGTGATGGGTTTATAGGTCAAGACATATGGTTTCAGAACACGGCGGGACCGGAGAAACACCAAGCGGTGGCTCTGCGCGTAGGCGCCGACCAATCCGTGATAAACCGTTGTCGCATAGATGCCTTTCAAGACACTCTCTACGCACACTCCAACAGGCAGTTCTACAGAGACTCTTTCATCACCGGCACCGTTGACTTCATTTTCGGAAACGCCGCCGTCGTCTTCCAGAAGTGCAACTTGGTGGCCCGAAAGCCCATGAGTAACCAAAAAAACATGGTGACGGCTCAAGGAAGAGAAGATCCAAACCAAAACACAGGAACTTCAATTCAACAGTGTAACCTAACACCCAGCTCAGATCTTAAGCCTGTTGTGGGTTCCATCAAAACTTTTCTGGGTCGACCATGGAAGAAGTACTCCAGAACTGTGGTGATGCAGTCGACAATAGATAACCATGTTGATCCAACGGGATGGGCAGAGTGGGATGCTCAGAGTAAGGACTTTTTGCAAACGTTGTATTATGGAGAGTACATGAACAGTGGAGCTGGTGCTGGAACGAGCAAGAGAGTGACTTGGCCTGGTTATCATGTAATCAAAACTGCAGCAGAAGCCAGCAAGTTCACTGTAACACAGCTCATCCAAGGAAATGTTTGGTTGAAGAACACCGGTGTCAACTTCATTGAAGGCCTCTAA	1650	0.4709	MATQQQSLLEKPKKPVSKTICLFLSVIAVLSSSAFIASYLFNNSSLHHVCDQALDTASCLTHVSEVTKTHTFTTTEHHKLNLLKSFLMKYTSHIEKVMDTTSAIKLRVNNPREEAALRDCAELMDLSLDRVWSSMLAVTEQSIESRQDAHTWLSSVLTNHATCLDGLEGASRSVMEGEVEDLISRARTSLAILVGSVLPPKVEEIIDEPLNGEFPSWVSSKDRRLLESGVGDIKANVVVAKDGSGKFKTVTEAVASAPDNGKTRYVIYVKKGTYKENVEIGKKKKNVMLVGDGMDATIITGSLNFIDGTTTFNSATVAAVGDGFIGQDIWFQNTAGPEKHQAVALRVGADQSVINRCRIDAFQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVVFQKCNLVARKPMSNQKNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGSIKTFLGRPWKKYSRTVVMQSTIDNHVDPTGWAEWDAQSKDFLQTLYYGEYMNSGAGAGTSKRVTWPGYHVIKTAAEASKFTVTQLIQGNVWLKNTGVNFIEGL*	550

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu2g0502	549	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	22	182	IPR006501	GO:0004857
	Pvu2g0502	549	CDD	PMEI-like_4	54	194	-	-
	Pvu2g0502	549	SUPERFAMILY	Pectin lyase-like	234	548	IPR011050	-
	Pvu2g0502	549	Gene3D	Invertase/pectin methylesterase inhibitor family protein	41	194	IPR035513	-
	Pvu2g0502	549	Pfam	Plant invertase/pectin methylesterase inhibitor	45	191	IPR006501	GO:0004857
	Pvu2g0502	549	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	44	192	IPR035513	-
	Pvu2g0502	549	ProSitePatterns	Pectinesterase signature 2.	380	389	IPR033131	-
	Pvu2g0502	549	PANTHER	PECTINESTERASE	26	547	-	-
	Pvu2g0502	549	Pfam	Pectinesterase	236	535	IPR000070	GO:0030599\|GO:0042545
	Pvu2g0502	549	ProSitePatterns	Pectinesterase signature 1.	261	280	IPR018040	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g0502	Pvu-Chr2	4549475	4551542	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu2g0502	1	549	Carbohydrate Esterase	AT1G11580	58.584	0.0	647

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g0502	K01051		-	gmx:100815836	926.776

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