Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0501 ATGGCTATCCAAGAATCTCTGCTAGAGAGGCCAAGAAATTCTGCTACCAAAACTATCTGTTTAATCTTCTCTGTAGCTGCTGTCATATGCTCATCACTCTTTGCTGCTTCTTATTTCATCAAACCCAGTTCCTTCCTTAACCAATCCTCTCCTCAACATCTCTGTCATCATGCACTTGATAACCCATCATGCTTAGCACATCTCTCAGAAGTGGTTCAAGGTCCCATCTTCACCACAACAAAAGACCACAGCTTCAATTTGTTCCACTCTTTCTTATTGAAATCCACCTCACACATTCAGAGAGCCATGAACACAGCTAGTTCCATCAAACTTAGGGTTAACAGTCCCAAGGAGGAAGCAGCTTTGAACGACTGCGTGGAGCTGATGGATTTATCCATCGACAGAGTTTTGGACTCAATGCTAACTCTAACAAACCAAACCACTGAGTCACAGCAAGATGCACACACATGGCTAAGTAGCGTGCTCACTAACCATGCAACTTGTTTGGATGGGTTAGAGGGGACAGCTCGAGCACTTATGGAGGCTGAACTCGAGGACTTGATATCCAGAGCAAGAACAACTCTGGCTATGTTTGTTACTGTTTTGCCCCCGAGGGTTGAACCAATCGTTGATGAGCCACTGAATGGGGAGTTTCCCTCGTGGTTGAGAAGCAAGGATAGGAGGCTTTTGGAGTCCAGTGTTGGGGACATCAACGCCAACGTTGTGGTGGCCAAGGATGGAAGCGACAAGTTTAAGACTGTGGCTGAGGCTGTGAAATCTGCACCTGTAAACAGTAAGACAAGGTATGTTATTTACGTGAAAAAAGGAACATATAAAGAGAATGTTGAAATTTGTCAGACAAAGAAGAACGTGATGCTCGTTGGAGATGGTAAGGATCTAACTGTAATTACCGGCAGCTTGAATTATGTTGACGGAACGGGCACATTTCAGACTGCAACTGTGGCTGCTGTGGGGGATGGATTTATAGGTCAAGACATATGGTTCCAGAACACTGCAGGCCCACAGAAGCAACAAGCAGTGGCTCTGCGCGTAGGCGCCGACAAATCCGTCATAAACCGTTGTCGCATAGATGCCTTCCAAGACACACTCTACGCACACTCCAACAGGCAGTTCTACAGAGACTCTTTCATCACCGGCACCGTTGACTTCATTTTTGGAAACGCCGCCGTCGTCTTCCAAAAGTGCAACTTGGTTGCCCGAAAGCCCATGAGTAACCAAAAAAACATGGTGACGGCTCAAGGAAGAGAAGATCCAAACCAAAACACAGGAACTTCAATTCAACAATGTAACCTAACACCCAGCTCAGATCTTAAGCCTGTTGTGGGTTCCATCAAAACTTATCTGGGTCGACCATGGAAGAAGTACTCCAGAACTGTGGTGATGCAGTCGACAATAGAGAACCATATTTACCCAACAGGATGGGCAGAGTGGGATGAAAAGAGTAAGGACTTTTTGCAAACATTGTATTATGCAGAGTACAATAACAGTGGAGCAGGTGCTGGAAGCAGCAAGAGAGTGAACTGGCCTGGTTACCATAAGAGCATAACTGCAACAGAAGCCTCAAAGTTCACAGTAACACAGCTCATCCAAGGAAATGTTTGGCTGAAAAACACCGGGGTCAACTACACGGAAGGCCTCTAA 1662 0.4585 MAIQESLLERPRNSATKTICLIFSVAAVICSSLFAASYFIKPSSFLNQSSPQHLCHHALDNPSCLAHLSEVVQGPIFTTTKDHSFNLFHSFLLKSTSHIQRAMNTASSIKLRVNSPKEEAALNDCVELMDLSIDRVLDSMLTLTNQTTESQQDAHTWLSSVLTNHATCLDGLEGTARALMEAELEDLISRARTTLAMFVTVLPPRVEPIVDEPLNGEFPSWLRSKDRRLLESSVGDINANVVVAKDGSDKFKTVAEAVKSAPVNSKTRYVIYVKKGTYKENVEICQTKKNVMLVGDGKDLTVITGSLNYVDGTGTFQTATVAAVGDGFIGQDIWFQNTAGPQKQQAVALRVGADKSVINRCRIDAFQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVVFQKCNLVARKPMSNQKNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGSIKTYLGRPWKKYSRTVVMQSTIENHIYPTGWAEWDEKSKDFLQTLYYAEYNNSGAGAGSSKRVNWPGYHKSITATEASKFTVTQLIQGNVWLKNTGVNYTEGL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0501 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 197 IPR035513 -
Pvu2g0501 553 PANTHER PECTINESTERASE 39 551 - -
Pvu2g0501 553 ProSitePatterns Pectinesterase signature 1. 265 284 IPR018040 -
Pvu2g0501 553 CDD PMEI-like_4 63 201 - -
Pvu2g0501 553 TIGRFAM PME_inhib: pectinesterase inhibitor domain 26 177 IPR006501 GO:0004857
Pvu2g0501 553 PANTHER PECTINESTERASE 39 551 - -
Pvu2g0501 553 Pfam Plant invertase/pectin methylesterase inhibitor 52 186 IPR006501 GO:0004857
Pvu2g0501 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 201 IPR035513 -
Pvu2g0501 553 Gene3D - 234 553 IPR012334 -
Pvu2g0501 553 SUPERFAMILY Pectin lyase-like 238 552 IPR011050 -
Pvu2g0501 553 SMART PMEI_2 46 197 IPR006501 GO:0004857
Pvu2g0501 553 Pfam Pectinesterase 240 539 IPR000070 GO:0030599|GO:0042545
Pvu2g0501 553 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0501 Pvu-Chr2 4528840 4530837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0501 5 553 Carbohydrate Esterase AT1G11580 55.160 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0501 K01051 - gmx:100815836 930.628