Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0500 ATGGCTATCCAAGAATCTCTGCTAGAGAGGCCAAGAAATTCTGCTACCAAAACTATCTGTTTAATCTTCTCTTTGGCTGCTCTCATATGCTCCTCAGTCTTTGCTGCTTCTTATTTCATCAAACCCAGTTCCTTCCTTAACCAATCCTCTCCTCAACATCTCTGTCATCATGCACTTGATAACCCATCATGCTTAGCACACCTCTCAGAAGTGGTTCAAGGTCCCATCTTCACCACAACAAAAGACCACAGCTTCAATTTGTTCCACTCTTTCTTATTGAAATCCACCTCACACATTCAGAGAGCCATGAACACAGCTAGTTCCATCAAACTTAGGGTTAACAGTCCCAAGGAGGAAGCAGCTTTGAACGACTGTGTGGAGCTGATGGATTTATCCATCGACAGAGTTTTGGACTCAATGCTAACTCTAACAAACCAAACCACTGAGTCACAGCAAGATGCACACACATGGCTAAGTAGCGTGCTCACTAACCATGCAACTTGTTTGGATGGGTTAGAGGGGACAGCTCGAGCCCTTATGGAGGCTGAACTTGAGGACTTGATATCCAGAGCAAGAACCGCTCTGGCCATGTTTGTGACTGTTTTGCCCCCGAGGGTTGAACCAATCGATGAGCCACTGAATGGGGAGTTTCCCTCTTGGTTGAGCAGCAAGGATAGGAGGCTTTTGGAGTCCAGTGTTGGGGACATCAATGCCAACGTTGTGGTGGCAAAGGATGGAAGTGGGAAATTCAAGACTGTGGCTGAGGCTGTGGCATCTGCACCTGATAACAGTAAGACAAGGTATGTTATTTACGTGAAAAAAGGAACATATAAAGAGAATGTTGAAATTGGTAAGAAGAAGAAGAACGTGATGCTCGTTGGAGATGGTAAGGATCTAACTGTAATTACCGGCAGCTTGAATTATATTGACGGAACGGGCACATTTCAGACTGCAACTGTGGCTGCTGTGGGGGATGGATTTATAGGTCAAGACATATGGTTCCAGAACACTGCAGGCCCACAGAAGCACCAAGCAGTGGCTCTTCGAGTAGGTGCCGACCAATCCGTCATAAACCGATGTCGCGTAGATGCCTATCAAGACACTCTCTACGCACACACCAACAGGCAGTTCTACAGAGACTCTTTTATCACCGGCACCGTTGACTTCATTTTCGGAAACGCCGCCGTCGTCTTCCAAAAGTGCTACTTGGTGGCCCGAAAGCCCATGAGTAACCAAAAAAACATGGTGACGGCTCAAGGAAGAGAAGATCCAAACCAAAACACAGGAACTTCAATTCAACAATGTAACATAACACCCAGCTCAGATCTCAAGCCTGTTGCGGGTTCCATCAAAACTTATCTGGGTCGACCATGGAAGAAGTACTCCAGAACTGTTGTGATGCAGTCGACAATAGAGAACCATATTGACCCAGCAGGATGGGCAGAGTGGGATGACAAGAGTAAGGACTTTTTGCAAACTTTGTATTATGCAGAGTACATGAACAGTGGAGCAGGTGCTGGAACCAGCAAAAGAGTGAACTGGCCTGGTTACCATAAGACCATAACTACAGCAGAAGCCAACAAGTTCACAGTAAAACAGTTTATCCAAGGAAATGTTTGGTTGAAGAACACAGGGGTGAACTATATAGAAGGCCTCTAA 1659 0.4587 MAIQESLLERPRNSATKTICLIFSLAALICSSVFAASYFIKPSSFLNQSSPQHLCHHALDNPSCLAHLSEVVQGPIFTTTKDHSFNLFHSFLLKSTSHIQRAMNTASSIKLRVNSPKEEAALNDCVELMDLSIDRVLDSMLTLTNQTTESQQDAHTWLSSVLTNHATCLDGLEGTARALMEAELEDLISRARTALAMFVTVLPPRVEPIDEPLNGEFPSWLSSKDRRLLESSVGDINANVVVAKDGSGKFKTVAEAVASAPDNSKTRYVIYVKKGTYKENVEIGKKKKNVMLVGDGKDLTVITGSLNYIDGTGTFQTATVAAVGDGFIGQDIWFQNTAGPQKHQAVALRVGADQSVINRCRVDAYQDTLYAHTNRQFYRDSFITGTVDFIFGNAAVVFQKCYLVARKPMSNQKNMVTAQGREDPNQNTGTSIQQCNITPSSDLKPVAGSIKTYLGRPWKKYSRTVVMQSTIENHIDPAGWAEWDDKSKDFLQTLYYAEYMNSGAGAGTSKRVNWPGYHKTITTAEANKFTVKQFIQGNVWLKNTGVNYIEGL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0500 552 PANTHER PECTINESTERASE 31 550 - -
Pvu2g0500 552 TIGRFAM PME_inhib: pectinesterase inhibitor domain 26 176 IPR006501 GO:0004857
Pvu2g0500 552 ProSitePatterns Pectinesterase signature 2. 383 392 IPR033131 -
Pvu2g0500 552 CDD PMEI-like_4 63 201 - -
Pvu2g0500 552 SUPERFAMILY Pectin lyase-like 237 551 IPR011050 -
Pvu2g0500 552 SMART PMEI_2 46 197 IPR006501 GO:0004857
Pvu2g0500 552 PANTHER PECTINESTERASE 31 550 - -
Pvu2g0500 552 Pfam Pectinesterase 239 538 IPR000070 GO:0030599|GO:0042545
Pvu2g0500 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 198 IPR035513 -
Pvu2g0500 552 Pfam Plant invertase/pectin methylesterase inhibitor 52 196 IPR006501 GO:0004857
Pvu2g0500 552 ProSitePatterns Pectinesterase signature 1. 264 283 IPR018040 -
Pvu2g0500 552 Gene3D - 233 552 IPR012334 -
Pvu2g0500 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 201 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0500 Pvu-Chr2 4521874 4524126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0500 5 552 Carbohydrate Esterase AT1G11580 57.576 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0500 K01051 - gmx:100815836 944.11