Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0499 ATGGCAACACACCAATCTCTGTTAGAAAACCCTAGAAAACCCGTTTCCAAAACCATATGCTTAATCCTCTCTGTAGCTGTTGTGCTAACTTCATCAGCTCTCATCGCTTCTTATCTCACAAAACCCACCATCTTATTCAGCCACACCATCTCTCACCATGTTTGCGATCACGCAATTGATACTCCAGCATGCTTAGCACATGTCTTAGAACTGGTACAAGATCCGATCTCGCAAAACCACAAATTCGGCTTGCTCCAGTCTTTTTTAGCGAGATCCGCTTCACACATTGAGAAAGCGATGGAGGCAGCGAACGCCACAAGGGTGAGGATGAACAATCCAAGAGAAGAAGCTGCCTTGCGGGATTGCGTGGAGCTCATGGAGTTATCCATGGAAAGAGTTCGGGACTCAAAGGCGAGCCTAGCCAAAGACACCGCTGATTCTGTTGAAGATGCACACACTTGGCTCAGCAGCGTGCTCACCAATCATGTAACATGCTTGGATGGATTGGAGGAGCGAGGTGGAAGGGTTATGGAGGAAGAGGTTCAGGAATTGATCTCGCGCGCAAGAACCTCTTTAGCCATGCTTGTTGCTGTTCTGCCTCCAAATCCGAAGGTGGAAGAGGTGTCGGAAAATGGGAAGTTTCCGTCATGGGTGAGAAGCAGGGATCGGAAGCTGTTGGAGTCTTGGGCGGGAGAGATTACGGCGAACGTTGTGGTGGCTAAGGACGGGAGTGGTGACTTCAAGACGGTTGCTGAAGCGGTGGCATCAGCGCCGGAGAAAAGCAAGAAGAGGTATGTTATTCATGTGAAGAGCGGAACATATAAAGAGAACGTTGAAATCGGAAAGAGAAAGAAGAACGTGATGCTGGTGGGTGACGGCATGAATACCACTATAATCACCGGAAGCTTGAACTTCATCGACGGAACGGGCACCTTCAGAACTGCTACTGTTGCGGCGGTTGGGGATGGGTTTATAGCCCAAGACATTTGGTTTCAGAATACAGCAGGCCCAGAAAAGCACCAGGCAGTGGCTCTTCGCGTGGGCTCTGACGAATCGGTGATAAATCGTTGCCGCGTGGACGCATATCAAGACACTCTCTACGCCCATTCCAACAGACAGTTCTACCGCGACTCCTTCATTGCGGGCACCATTGACTTCATCTTCGGAAACGCTGCTGCTGTGTTCCAGAACTGTAAGCTAGAGGCCCGGAAGCCCATGAGTAGTCAGAAAAACATGGTGACGGCCCAAGGACGAACAGACCCAAACCAGAACACAGGAACTTCAATTCAACAGTGTGAGCTCTCCCCCTGCGCGGATCTCAGGCCCGTTATAGACTCTTTCAAAACTTATTTGGGCCGCCCGTGGAAGAACTTCTCAAGAACTGTTGTGATGCAATCGTTTTTGGACAAGCACATTGACCCTGAGGGATGGGCCGAATGGGATGCGGAACATAAAAGCTATTTGGAGACCCTATATTATGGAGAGTACATGAACAAAGGACCAGGAGCTGGTACCAGTGAAAGAGTGAATTGGAGTGGTTACCACATCATCAAAACTGAGGCTGAGGCCAACCACTTCACTGTAAAAAACCTGATCCAAGGTGATGTTTGGTTGAAGAACAGTGGTGTCAACTTCATTGAAGGTCTATAA 1650 0.4915 MATHQSLLENPRKPVSKTICLILSVAVVLTSSALIASYLTKPTILFSHTISHHVCDHAIDTPACLAHVLELVQDPISQNHKFGLLQSFLARSASHIEKAMEAANATRVRMNNPREEAALRDCVELMELSMERVRDSKASLAKDTADSVEDAHTWLSSVLTNHVTCLDGLEERGGRVMEEEVQELISRARTSLAMLVAVLPPNPKVEEVSENGKFPSWVRSRDRKLLESWAGEITANVVVAKDGSGDFKTVAEAVASAPEKSKKRYVIHVKSGTYKENVEIGKRKKNVMLVGDGMNTTIITGSLNFIDGTGTFRTATVAAVGDGFIAQDIWFQNTAGPEKHQAVALRVGSDESVINRCRVDAYQDTLYAHSNRQFYRDSFIAGTIDFIFGNAAAVFQNCKLEARKPMSSQKNMVTAQGRTDPNQNTGTSIQQCELSPCADLRPVIDSFKTYLGRPWKNFSRTVVMQSFLDKHIDPEGWAEWDAEHKSYLETLYYGEYMNKGPGAGTSERVNWSGYHIIKTEAEANHFTVKNLIQGDVWLKNSGVNFIEGL* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0499 549 Pfam Pectinesterase 236 535 IPR000070 GO:0030599|GO:0042545
Pvu2g0499 549 PANTHER PECTINESTERASE 21 548 - -
Pvu2g0499 549 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 194 IPR035513 -
Pvu2g0499 549 ProSitePatterns Pectinesterase signature 2. 380 389 IPR033131 -
Pvu2g0499 549 TIGRFAM PME_inhib: pectinesterase inhibitor domain 22 183 IPR006501 GO:0004857
Pvu2g0499 549 ProSitePatterns Pectinesterase signature 1. 261 280 IPR018040 -
Pvu2g0499 549 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 198 IPR035513 -
Pvu2g0499 549 Pfam Plant invertase/pectin methylesterase inhibitor 53 189 IPR006501 GO:0004857
Pvu2g0499 549 CDD PMEI-like_4 39 198 - -
Pvu2g0499 549 SMART PMEI_2 46 194 IPR006501 GO:0004857
Pvu2g0499 549 Gene3D - 230 549 IPR012334 -
Pvu2g0499 549 PANTHER PECTINESTERASE 21 548 - -
Pvu2g0499 549 SUPERFAMILY Pectin lyase-like 234 548 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0499 Pvu-Chr2 4514430 4516330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0499 3 549 Carbohydrate Esterase AT1G11580 53.142 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0499 K01051 - gmx:100815836 802.742