Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0480 ATGCCGGAATCTGCATACATTGTGACGTCTGGCAGTGAAGCCACCGGAGAAGAAAAATCATCTACTTTTTTTGAAATAGCAATTGGAATTGATCTTGGCACATCACAATGTAGTGTTGCTGTGTGGAGTGGTTTCCGAGTGGAGCTTTTGAAGAACACAAGGAATGAAAAGATTATGAAATCGTATGTGACTTTCAAAGGTGACACCCCTTCTGGTGGAGTTTGCAGTCAACCCTCCATCGAGGATGAGATGTTCTCTAGAGCCACCATTTTCAACCTGAAACGCCTGATAGGCAGAGTTGATACCGATCTGGTTGTCCAAGCCTGTAAGAATCTCCCTTTTCTAGTGCAGACTATGGACATTGGTGTTTGCCCATTAATTGTCGCATTAGTAAACAATATGTGGAGATCCACCACTCCAGAAGAAGTCCTAGCGATATTTCTGGTGGAATTAAGAGCCATAATTGAAGATAAGCTGAAACGACGAATAAGAAATCTAACCCGGATAGGGCGTGCGTGTGCCATGGCTGACCTTCATGTTCTCATGTTGATGCCTGAACCGACAGCCGTGGCTTTGTTGTACGCTCAACAACAACAGCAAAATTGTCATGAGAATATGGGCAGTGGAAGCGAGAAAATTGCTCTCGTTTTCAATATGGGTGCTGCGGGAAGAGTTTCACAGATTAAAGCCTTGGCAGGAAGTAACATTGACTTGCTTCAAAATATGATGTTTCATCTTTTGCCAGAATCTGAAAATCATTTTCAAAGCCATGAGGTCAGTGAAATGAAGCGGATGGGCCTGCTTCGAGTTGCAACCCAGGATGCAATTCACCAGCTTTCCTCTCAGAACACAGTTCAGGTTGATGTTGATTTGGGAGATGATGTGAAGATATGCAGAGTTGTTCAGCGGGAGGAGTTTGAGGAGGTAAATAGAAAGGTGTTTGAGAAATGTGAAAGCCTTATCATTCAGTGCTTGAAAGATGCCAAGGTAGAATTTCAAGACTTAAATGATGTGATAATTGTAAGTGGATGCTCTTGTATCCCAAGAGTGAAGAGTCTTCTTGCTAAAATTTGTGGAAGGAAGGAACTTTATAAAGGCATGAATCCTTTGGAAGCTGTTGTTTGTGGTGCAGCAGTGGAAGGAGCAGTGGCTTCAGGCATCAATGATCCCTTGGGGAACTTGGACTTGTTAACTATCCAAATTACACCTCTTGCCATTGGAATTTGTGCTGATGGTAACAAATTTGTGCCTATAATTCCGAAAGATATCGCAATGCCAACGCGAAAGAAACTAGTTTTTACAACATGA 1308 0.4258 MPESAYIVTSGSEATGEEKSSTFFEIAIGIDLGTSQCSVAVWSGFRVELLKNTRNEKIMKSYVTFKGDTPSGGVCSQPSIEDEMFSRATIFNLKRLIGRVDTDLVVQACKNLPFLVQTMDIGVCPLIVALVNNMWRSTTPEEVLAIFLVELRAIIEDKLKRRIRNLTRIGRACAMADLHVLMLMPEPTAVALLYAQQQQQNCHENMGSGSEKIALVFNMGAAGRVSQIKALAGSNIDLLQNMMFHLLPESENHFQSHEVSEMKRMGLLRVATQDAIHQLSSQNTVQVDVDLGDDVKICRVVQREEFEEVNRKVFEKCESLIIQCLKDAKVEFQDLNDVIIVSGCSCIPRVKSLLAKICGRKELYKGMNPLEAVVCGAAVEGAVASGINDPLGNLDLLTIQITPLAIGICADGNKFVPIIPKDIAMPTRKKLVFTT* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0480 435 PRINTS 70kDa heat shock protein signature 26 39 - -
Pvu2g0480 435 PRINTS 70kDa heat shock protein signature 54 66 - -
Pvu2g0480 435 PRINTS 70kDa heat shock protein signature 335 351 - -
Pvu2g0480 435 PRINTS 70kDa heat shock protein signature 367 387 - -
Pvu2g0480 435 PRINTS 70kDa heat shock protein signature 395 414 - -
Pvu2g0480 435 Gene3D Actin; Chain A, domain 4 236 316 - -
Pvu2g0480 435 Pfam Hsp70 protein 27 435 IPR013126 GO:0005524|GO:0140662
Pvu2g0480 435 ProSitePatterns Heat shock hsp70 proteins family signature 1. 30 37 IPR018181 -
Pvu2g0480 435 Gene3D - 91 146 - -
Pvu2g0480 435 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 6 430 - -
Pvu2g0480 435 Gene3D - 28 380 - -
Pvu2g0480 435 SUPERFAMILY Actin-like ATPase domain 214 383 IPR043129 -
Pvu2g0480 435 CDD HSP70_NBD 28 382 - -
Pvu2g0480 435 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 435 IPR029047 -
Pvu2g0480 435 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 390 435 IPR029047 -
Pvu2g0480 435 PANTHER HEAT SHOCK PROTEIN 70KDA 6 430 IPR013126 GO:0005524|GO:0140662
Pvu2g0480 435 SUPERFAMILY Actin-like ATPase domain 26 196 IPR043129 -
Pvu2g0480 435 Gene3D - 199 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0480 Pvu-Chr2 4303859 4308935 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0480 27 435 Calmodulin-binding Proteins AT3G12580 31.250 1.55e-53 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0480 K09489 - gmx:100809773 654.44