Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0475 ATGATGTTCATTCACCATATGCATGCATCTATATATTATGACGATACAGCTTCAGTTTTTATTACATTGCATCTCTCTTTTCTACCAAAAATGCCTATCCAATTCCTTCTCTTTCTTGCCTTCTTTCTATGTTCATTTGCTTCAAGGAACGCTAACTCAACCCAACTGGGGTCCAGCATTGTGGCCGGAACCAATTCATCTTGGCGATCATCCTCCGGGGATTATGCCTTTGGATTCTTCCACTTTGGTAGTGGCCGCTATCTTGTTGGAATTTGGTTTGACAAAATTCCAAACAAAACATTGGTTTGGTCTGCAAACCGTGACAACCCAGTTGAAATTGGATCATCCATCAATCTCACACGAAGTGGCCAATTTGTGGTCCAACCTCTCAATGGGGATTCATTTTCCATCTATAAAGGAACAAACGCAGCATCTGCAGTGATGCAGGATGATGGGAATTTCGTTTTGAGGAGTTCAGTTTCCAACGTTATATGGCAGAGCTTTGATTCACCCACGGATACTCTTCTATTAGGCCAAACTTTGAATACCAGTCAGAAACTCTACTCCAATGCCAATGGATCAGTAGACTACTCAACTGGACAATACAGTTTGGAGATCCAACAATGGGATGGCAACATTTTTCTTAAAGCTTATCGGTTCACGGATTCTGCCTACTGGTGGAGTAACACTGCCGGTAATAAAGGTGTCAGAATTATTTTTAACAGCACAACAGCTTTTCTTTACGCGGTCAATGACACCAACCAAATTATATCTAACATGACTACTGAAGTAGAGGGTTCAATCGAAGATTACTATCATCGTGTGTTGGTGGATGACAAGGGAAACTTTCAGAAGTTGATTTACCATAAAGAAAATGGAAATGAGTGGAGATCTGTGTGGCAGGCCGTAACAAAGCCTTGCACTGTCACTGCCCTTTGCGGGGTGTATGGCTTTTGCAACACGTCTGATTCTGACACCCAAACATACACTTGTGGTTGCTTGCCAGGCTATACTCCTTTGGATCCAACGGCACCCTCCAAGGGGTGCTATCTCAGTGAGGTCAAGGACTTGTGTGCTGCAAATTCTTCTGCCTCAAACTTTATGGTGGAAGTGAAAGAGATTCAAGATGCTGATATACCGAACCCCCGTTACTTTTTTCTTGATCTACAAGTCTTGAATATGATGGATTTGGAAAGTTGCAAGAGGGAACTGATGGATGATTGTCTCTGCATGGCAGCTGTTTTAGATGGCACTGATTGCCATAAGAAAAAGTGGCCAATTATAAATGCCATAAGAATCATTCCTGACACTAGTAATCGTGTGATGCTTATTAAAGTTCCTCTGGTTGACAACATGGACAATGGAAAGGATTCATCGTCTTTGGTTGTTTTGGTAGTGTCTCTCTTTTCTTGCTCCTTACTTGCTGTACTGTTTGCAGCCACTGCCATTTATCATCACCCCGTTTGCCAGCATCTCATGCACAGACGAGCACCACCAAAGCCAAAGCCCGTGGATATCAATCTAAAGGTATTTTCATTCCAACAGCTGAGAGAAGCAACTAATGGATTCAAAGACAAACTCGGTGGAGGAGCCTATGGTACGGTGTATAGTGGGGTTTTAAACTTGGAGGATCAACAGGTTGATGTTGCTGTCAAACAACTGGAGCAAGTAGAGGAGCAAGGTGATAAAGAATTTGTGACAGAAGTTCAAGTTATTGGTCTCACTTATCATAGAAATCTAGTTGGTTTATTGGGCTTCTGCAATGAGCAGAGTCATAGGCTTTTGGTTTATGAGAAAATGGAAAACGGTACACTATCCAACTTCCTTTTCGGAGAAGGGGATAAACCCAGCTGGGAGAGAAGAGTCAGAATTGTGCTTGAAATTGCAAGAGGCTTGTTGTATCTGCATGAAGAGTGTGACCATCAAATCATCCACTGTGACATAAAGCCTCAGAATGTTCTGCTTGACTCTAGTTACACTGCAAAGATCTCAGATTTTGGACTGGCAAAGTTGCTAATGAAAGATAAAAGTCGAACAAACACCAAAGCTAGAGGGACAGTGGGATATATGGCACCAGAATGGCTCAAAAATGCACCTGTCACTACAAAGGTGGATATCTACAGCTTTGGTGTGATGTTGTTGGAAATCATATTTTGCAGAAAACACATTGAGTTGCATCAAATTGAGGATGAAACAATGGGTGATGACTTGATACTAACAGATTGGGTTTTGTATCTGGCAAAAGAAAAGAATTTAAGAGCCCCAGTGATAGATCTTCTTGAAGATGAAAGTGATATGAGGAGGTTTGAAAGAATGGCAATGGTTGGATTATGGTGCGTAAACACCAATCCAACTCTTCGACCATCTATGAAACTTGTGGTGCAGATGTTGGAAGGAAACGTAGAAGTTGGTGTTCCTCCACTCAACTCATAG 2433 0.4188 MMFIHHMHASIYYDDTASVFITLHLSFLPKMPIQFLLFLAFFLCSFASRNANSTQLGSSIVAGTNSSWRSSSGDYAFGFFHFGSGRYLVGIWFDKIPNKTLVWSANRDNPVEIGSSINLTRSGQFVVQPLNGDSFSIYKGTNAASAVMQDDGNFVLRSSVSNVIWQSFDSPTDTLLLGQTLNTSQKLYSNANGSVDYSTGQYSLEIQQWDGNIFLKAYRFTDSAYWWSNTAGNKGVRIIFNSTTAFLYAVNDTNQIISNMTTEVEGSIEDYYHRVLVDDKGNFQKLIYHKENGNEWRSVWQAVTKPCTVTALCGVYGFCNTSDSDTQTYTCGCLPGYTPLDPTAPSKGCYLSEVKDLCAANSSASNFMVEVKEIQDADIPNPRYFFLDLQVLNMMDLESCKRELMDDCLCMAAVLDGTDCHKKKWPIINAIRIIPDTSNRVMLIKVPLVDNMDNGKDSSSLVVLVVSLFSCSLLAVLFAATAIYHHPVCQHLMHRRAPPKPKPVDINLKVFSFQQLREATNGFKDKLGGGAYGTVYSGVLNLEDQQVDVAVKQLEQVEEQGDKEFVTEVQVIGLTYHRNLVGLLGFCNEQSHRLLVYEKMENGTLSNFLFGEGDKPSWERRVRIVLEIARGLLYLHEECDHQIIHCDIKPQNVLLDSSYTAKISDFGLAKLLMKDKSRTNTKARGTVGYMAPEWLKNAPVTTKVDIYSFGVMLLEIIFCRKHIELHQIEDETMGDDLILTDWVLYLAKEKNLRAPVIDLLEDESDMRRFERMAMVGLWCVNTNPTLRPSMKLVVQMLEGNVEVGVPPLNS* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0475 810 Coils Coil 540 560 - -
Pvu2g0475 810 Pfam Protein kinase domain 524 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0475 810 SMART blect_4 59 171 IPR001480 -
Pvu2g0475 810 Gene3D - 171 311 - -
Pvu2g0475 810 CDD B_lectin 70 171 IPR001480 -
Pvu2g0475 810 SMART serkin_6 521 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0475 810 Gene3D Phosphorylase Kinase; domain 1 498 598 - -
Pvu2g0475 810 PIRSF SRK 25 810 IPR024171 GO:0004674
Pvu2g0475 810 Pfam D-mannose binding lectin 100 186 IPR001480 -
Pvu2g0475 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Pvu2g0475 810 ProSiteProfiles Protein kinase domain profile. 521 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0475 810 CDD STKc_IRAK 527 799 - -
Pvu2g0475 810 SUPERFAMILY Protein kinase-like (PK-like) 501 798 IPR011009 -
Pvu2g0475 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 33 808 - -
Pvu2g0475 810 Gene3D Transferase(Phosphotransferase) domain 1 600 803 - -
Pvu2g0475 810 Gene3D - 48 170 IPR036426 -
Pvu2g0475 810 ProSiteProfiles Bulb-type lectin domain profile. 53 169 IPR001480 -
Pvu2g0475 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 230 IPR036426 -
Pvu2g0475 810 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 808 - -
Pvu2g0475 810 ProSitePatterns Protein kinases ATP-binding region signature. 527 552 IPR017441 GO:0005524
Pvu2g0475 810 Pfam S-locus glycoprotein domain 247 339 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0475 Pvu-Chr2 4265468 4271432 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0475 426 803 Receptor kinase-like Gene Family AT1G56120 38.442 1.75e-64 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu2g0475 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0475 - - pvu:PHAVU_002G046100g 1622.45