Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0451 ATGGACATGGACACCCCAGAGAGGAACCAGATCAGTGCTACCCTCACCAAGTTTGAGGATTCACCTGTTTTCAATTATATCAACAGTTTGTCTCCTATAAAGCCCGTTAAGTCTGTTCCCATCAGTCAAACTTTCAATTCACTGAGCTTTTCGTCTCCTCCATCCGTTTTCACATCACCCCACGTCAGCTGTCTCAAGGAATCTAGATTCCTCAGAAGACATATCCCATTGGGCACATCAAAGCCTAAGGTTTCTTCTGAAGATGCAAGTAAAGTTCACACAACAAGTGAAGAGACTCTTACAGATTCTACACGTCATAACTCGAGTGAATTGCAGGAAAACACTGATAAAGGGATTTCTGTAGAAGATGCTTCGATTGAGCACATAAAATTCTCAGTTGAGCCACAGCAAACTCTAAAATATAGCAGTTGTGGTAGCCCTGGCTATGATCCCCCACTTTGTGGTGATGAGGGTAACACCCTTTTGGAACTGCCCGATGAGGCAGCAGCAGATGAAACTGATTCAAGTGAAGGGCATCTTCAGAAAATGTGTCAGATGGAGCCAAAGAGTGAAGATCCAGAGTGTTATTGGGATAGTTTAGTTCCTGATGGCCCTGATATGCTGATTTTTAATTCCCCAGGTGAAGCAGAAGCTTTTAAGGGTCTGATGCACAAACCTTTGGACTCTTCTATACGGCTGAGCGATGTTATGTCTGTGCTGCCAATTTCTACCATCCATAATGGTAGGAAAATGTACTTTGTTGATTCGGTTGCTTCAGGTTCTGAACATGAAATTGGAGATCACTGTTTTGAGCCAACTACAACAGCCATGGACACAGACCAAACACAGGATAATCTTGCCGATGTCGTCTTGGTGACTAGCAATTCTAATGAGAACGCTAATGATCAGCTTGTTTCTGTCACTCATCGTGCCATAAGGAGGCGTTGTCTAGACTTTGAGATGGCCAATGTACAAAGGAAGAACTCTGAAGATAATTCAAACGCTGGTTCAAGTACATCCAATGAAAAGCAACTGCATCCAGCAAAACTCAATGGGAATTTTCAGAGGGGAATTTTGCAGGGAATTGGTTTACACCTGAATGCACTTGCTGCCTTAAAAGAATACAAGGGCATACAAATTGAAAATTTGTCTTCTGGCACTTTGCAAATCTCTACAAGCATAGAACATCAGCATCTATCGTTGGTACCTGTCTCATCTGAAAGAGAGTTGGATTCATCAGACAATGGGCTTCAGCCTGCTGAAGATTGTTCCCAGCCATCGGTTTACATGGCTGGTGAAGACTTCAATAAGAATAGTAGCCCCAGAAAGAAAAAGCGTAAGGTGGAGACACCTGGAGAAACTGAGGGCTGTAAACGCTGCAATTGCAAGAAGTCAAAGTGTTTGAAGCTTTACTGCGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCCTGCTCCTGTCAGGATTGCTTCAACAAACCTATTCATGAAGACACAGTTCTTCAAACTCGCAAGCAGATTGAATCTCGTAATCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCTGATTCTGTTCCTGAAATTGGGGATGATCCAAACAAAACTCCAGCTTCAGCACGACACAAAAGAGGATGCAACTGCAAAAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTCGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAGAATGCTTTCGGCAGAAAAGATGGTTCTGCTCCTGTAGGCATAGAAACTGACTCAGAAGAGATAGAAGCAACTGAGAAGGGTGTGGCAGAAAGAGCTTCACACAAAACTGAAATTCAGAACACTGAAGATCATCCTGATTCTGCTACTGTGTCAACACCATTACGATTTTCCAGGCCATTGCTTCCATTGCCCTTTTCATCAAAGGGAAAGGCACCAATATCCTTTGTTACCACCATCTCAGGCTCTGCATTATTTTCCAGCCAAAAGCTTGGGAAACCAAACTCTCTTTGGTCTCAATCTAAGCATTTTCAAACTGCCCCAGATGAAGAAATGGCAGATATTCTCCTAGGTGATACCTCTCCTATCACATGCATCAAAACTTCTTCTCCAAATGGCAAGAGAATCTCCTCTCCCAGCTGTGACTTGGGATCATCACCTAGTCGCAGAGGTGGAAGAAAGTTGATATTACAATCCATTCCTTCATTTCCTTCTCTCACCCCTCACCCTTAG 2241 0.4328 MDMDTPERNQISATLTKFEDSPVFNYINSLSPIKPVKSVPISQTFNSLSFSSPPSVFTSPHVSCLKESRFLRRHIPLGTSKPKVSSEDASKVHTTSEETLTDSTRHNSSELQENTDKGISVEDASIEHIKFSVEPQQTLKYSSCGSPGYDPPLCGDEGNTLLELPDEAAADETDSSEGHLQKMCQMEPKSEDPECYWDSLVPDGPDMLIFNSPGEAEAFKGLMHKPLDSSIRLSDVMSVLPISTIHNGRKMYFVDSVASGSEHEIGDHCFEPTTTAMDTDQTQDNLADVVLVTSNSNENANDQLVSVTHRAIRRRCLDFEMANVQRKNSEDNSNAGSSTSNEKQLHPAKLNGNFQRGILQGIGLHLNALAALKEYKGIQIENLSSGTLQISTSIEHQHLSLVPVSSERELDSSDNGLQPAEDCSQPSVYMAGEDFNKNSSPRKKKRKVETPGETEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSAPVGIETDSEEIEATEKGVAERASHKTEIQNTEDHPDSATVSTPLRFSRPLLPLPFSSKGKAPISFVTTISGSALFSSQKLGKPNSLWSQSKHFQTAPDEEMADILLGDTSPITCIKTSSPNGKRISSPSCDLGSSPSRRGGRKLILQSIPSFPSLTPHP* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0451 746 SMART CXC_2 541 582 IPR033467 -
Pvu2g0451 746 SMART CXC_2 455 496 IPR033467 -
Pvu2g0451 746 MobiDBLite consensus disorder prediction 703 746 - -
Pvu2g0451 746 MobiDBLite consensus disorder prediction 403 422 - -
Pvu2g0451 746 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 458 493 IPR005172 -
Pvu2g0451 746 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 544 579 IPR005172 -
Pvu2g0451 746 MobiDBLite consensus disorder prediction 703 721 - -
Pvu2g0451 746 MobiDBLite consensus disorder prediction 326 346 - -
Pvu2g0451 746 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 745 - -
Pvu2g0451 746 MobiDBLite consensus disorder prediction 76 120 - -
Pvu2g0451 746 MobiDBLite consensus disorder prediction 437 456 - -
Pvu2g0451 746 ProSiteProfiles CRC domain profile. 456 581 IPR005172 -
Pvu2g0451 746 MobiDBLite consensus disorder prediction 86 120 - -
Pvu2g0451 746 MobiDBLite consensus disorder prediction 403 456 - -
Pvu2g0451 746 MobiDBLite consensus disorder prediction 323 346 - -
Pvu2g0451 746 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 745 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0451 Pvu-Chr2 4112368 4118243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0451 18 745 CPP Transcription Factor Family AT4G14770 44.712 5.26e-161 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pvu2g0451 TCR 1.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0451 - - gmx:100804447 1212.98