Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0440 ATGAGTACTGCTGGATGGTCCGATGAGGAATGCTCTGTCATTGGAGATAAGGCAGAAATTGGGTTTCTAGATTTTGAACAAGAGAAATCTGTTTGTAGTTATGGTGATTGTGAAGGGGTTCCGGTTATTGTATCTGCCCCATTTGCTTTTGTTGATGGCAAGCCTCGATCTGTGTTCGTAGGGGACACTGCTGTGGATTTAATAACCGTCAGGAATACTACTGATGAACCTGTGGACCTGTGGGGTGTTCATATTTTTGCCTCAAATCCTAAGGACAGTTTCACTCTCTCTCTCACAGAACCTCCATCGGAGAATTCAAATGCAGAGGAAGACCAGAGTTGCTTAGAATCTTTCTCTTTGGAGGACAGGGTGCTTCAGCCTCGTGAAAACCTAAAAATATGGTTGTCTTGCAAGGCAAAAGAAATGGGCATGTATTCATCAGTTGTATATTTTGATGCCGGAGATGAAAAAATTGAAAGGGTGGTTTTCCTCTTAATTGAAGACAAAATCTCCAAGTCTTTGGCTTCTAATAAGCCTTATTCAAGAGCAAGGAGAAAAGACAAATTTGTGGTAGATACTTATGTTGCAGGTTCACGTCCTGCAGGGAAGCCAACTCGAAGATACGTAAATAGGCTTCCAAAATATGACATTCCCAGGGCTATGAGAGAGTTGCTTGAGAGTAATCAGGTCCCCCAAGTTGTTGAAGAAGGTCTTACAAGAAGGACCTATTCATCTTATTTTAAAGCATTAATAATAATGGAAGAGATTCAATTGGAGGAAGACATGAGGACTTATGACATGGAATCCGTATCGATGAGGAAGAGGAACAATCAATTTTTGTCTATGGAGGTTCCTGGGCTTGCTGAGAGAAGACCATCTCTGGTTCATGGGGATAATATCTTTGTTAAGCTCGCATCTCGACGTGGTAATAACACCACACAGGTTTATCAGGGCTTTATTCACCGAGTTGAAGCTGATGAGATTTATTTGAAGTTTGATCCTGGATTTCACTATTACCACAGGGATGAATATGTCTATGATGTTCACTTCACCTACAACAGGATCAATATGAGAAGGTTATATCAAGCAGCTGAGGCAGCAGAAAACTTGGGTACGGACTTCCTTTTTCCATCTACTTCATCCAAAAAGAGACACATTAAAACCACTGCTCTAGTACCCATATCTGGTACTTTTAACGAGGAGCAAATTTGTTCAATCAAAATGATTCTCGGTTGCAAAGGTGCACCGCCTTATATGATTCATGGACCCCCTGGTACTGGAAAGACAAGCACAGTAGTGGAAGCAATCCTGCAGCTCTACAAATATCACAAGAATGCTCGGATTCTTGTGTGTGCACCCTCAAATAGTGCAGCAGATTACGTACTAGAGAAACTCCTTGCTCAACAGGACATTGAATTGAAAGAAAATGAAATATTCAGGCTCAATGCAGCTACCAGGCCATACGAGGAAGTCAAACCTGAAATTATCCGCTTCTGCTTTTTTGATGAAATGGTATTTAAGTGTCCCCCAGTCAACGCCCTCAGTTATTATAGGATCATAATATCCACATATATGAGTGCTTCTCTTCTTCATGCCGAAGATGTTGCCCGTGGTCACTTTTCCCATATTTTTTTGGATGAGGCTGGCCAAGCTTCTGAACCTGAAACCTTGATCCCTGTATCCCACCTCTGCACAATGAATACTGTTGTTGTTCTGGCTGGAGATCAATTGCAGTTGGGTCCAGTAATATATTCCAAGAAAGCAGATGAGTATGGGTTGGGGGTTTCATACATGGAACGATTGTCTGAAGTTCCTCCATATGCCAGTGGAGATACAAATTATGTAACACGATTGATTCGGAACTATCGATGCCACCCTGCAATTTTACACCTTCCTTCAAAGTTGTTCTATTGTGGGGAGTTGATTGCCTGTAGAGATTCCACAACTTTCATGACCATGGGGGAGTTGCTACCTAACAAGGAATTCCCTATTCTTTTCCAAGGCATCCAAGGATGTGATGAAAGAGAAGGAAATAACCCATCATGGTTCAACCGAATTGAAGCTAGTAAGGTAATAGAAGTTGTCAGGAGGCTGATAGCCGGAGGGAATATAAAGGAGGAAAACATTGGTATAATAGCTCCATATAGGCAGCAAGTGTCAAAAATAAAACAGACACTTGAAAATCTAGATATGCCTGACATCAAAGTGGGTAGTGTCGAACAATTCCAAGGACAAGAGAAGGAGGTTATTATCATATCAACAGTTCGATCAACTATCAAACACAACGAGTTTGACAAAGTTCACTGTCTGGGCTTTTTGAGCAATTATAGAAGGTTTAATGTGGCTATGACTCGTGCTATATCATTGCTGGTTATAATTGGGAATCCACATATAATCTGCAAGGATGACCATTGGAGTCAAATGTTGTGGTACTGTGTGGACAATTCATCTTACCAGGGTTGTTCTCTTCCTGAAAGGGTGGAACTGTATGATGATGAGGACACTGGAGAGAACCCATGCTTGACTGAAGATAATGCAGAATGGGGTCAAGATTCATCAAACAATGCAGAATGGGGTCAAGATCCATCAAACAATGCAGAATGGGGTCAAGATTCATCAAACAATGTAGAATGGGGTCAAGATTCATCCCAGATGGGGCTCCCTAAACCTGTTTACGATGAAGCTGAATGGTCTGATGGCTGGAGAAGTATATATATGAAGATGAAAGACTCACTAGCAGAAGTTCCGATGGTTTGA 2757 0.4153 MSTAGWSDEECSVIGDKAEIGFLDFEQEKSVCSYGDCEGVPVIVSAPFAFVDGKPRSVFVGDTAVDLITVRNTTDEPVDLWGVHIFASNPKDSFTLSLTEPPSENSNAEEDQSCLESFSLEDRVLQPRENLKIWLSCKAKEMGMYSSVVYFDAGDEKIERVVFLLIEDKISKSLASNKPYSRARRKDKFVVDTYVAGSRPAGKPTRRYVNRLPKYDIPRAMRELLESNQVPQVVEEGLTRRTYSSYFKALIIMEEIQLEEDMRTYDMESVSMRKRNNQFLSMEVPGLAERRPSLVHGDNIFVKLASRRGNNTTQVYQGFIHRVEADEIYLKFDPGFHYYHRDEYVYDVHFTYNRINMRRLYQAAEAAENLGTDFLFPSTSSKKRHIKTTALVPISGTFNEEQICSIKMILGCKGAPPYMIHGPPGTGKTSTVVEAILQLYKYHKNARILVCAPSNSAADYVLEKLLAQQDIELKENEIFRLNAATRPYEEVKPEIIRFCFFDEMVFKCPPVNALSYYRIIISTYMSASLLHAEDVARGHFSHIFLDEAGQASEPETLIPVSHLCTMNTVVVLAGDQLQLGPVIYSKKADEYGLGVSYMERLSEVPPYASGDTNYVTRLIRNYRCHPAILHLPSKLFYCGELIACRDSTTFMTMGELLPNKEFPILFQGIQGCDEREGNNPSWFNRIEASKVIEVVRRLIAGGNIKEENIGIIAPYRQQVSKIKQTLENLDMPDIKVGSVEQFQGQEKEVIIISTVRSTIKHNEFDKVHCLGFLSNYRRFNVAMTRAISLLVIIGNPHIICKDDHWSQMLWYCVDNSSYQGCSLPERVELYDDEDTGENPCLTEDNAEWGQDSSNNAEWGQDPSNNAEWGQDSSNNVEWGQDSSQMGLPKPVYDEAEWSDGWRSIYMKMKDSLAEVPMV* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0440 918 MobiDBLite consensus disorder prediction 832 891 - -
Pvu2g0440 918 CDD DEXXQc_Helz-like 399 623 - -
Pvu2g0440 918 Gene3D - 331 607 IPR027417 -
Pvu2g0440 918 Pfam AAA domain 595 796 IPR041679 -
Pvu2g0440 918 PANTHER DNA2/NAM7 HELICASE FAMILY 4 839 IPR045055 -
Pvu2g0440 918 CDD SF1_C_Upf1 624 812 IPR041679 -
Pvu2g0440 918 Pfam AAA domain 398 493 IPR041677 GO:0004386
Pvu2g0440 918 Pfam AAA domain 514 586 IPR041677 GO:0004386
Pvu2g0440 918 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 807 IPR027417 -
Pvu2g0440 918 PANTHER RNA HELICASE SDE3-RELATED 4 839 - -
Pvu2g0440 918 Gene3D - 623 823 IPR027417 -
Pvu2g0440 918 MobiDBLite consensus disorder prediction 845 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0440 Pvu-Chr2 4022669 4028257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0440 397 554 Core DNA Replication Machinery Family AT1G08840 29.193 3.80e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0440 K18422 - gmx:100801796 1592.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0440 2 4022669 4028257 Pvu2g0440 2 4022669 4028257 ECH