Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0432 ATGAATAAGAGTGGGGGAGGAGAGATGAGTAAGTGGCCCTTCACAGTGTCTCAGTGGCAGGAACTGGAACATCAAGCTTTGATTTACAAATACATGGTGGCGGGTCTTCCTGTGCCTCCTGATCTCGTCATTCCCATTCAGAACAGCTTCCATTCCATTTCCCAAACCTTCTTGCACCATCCCTCCTCTGCCATGAGTTATTGTTCCTTCTATGGAAAGAAGGTGGACCCAGAGCCAGGAAGATGCAGGAGGACTGATGGCAAAAAGTGGAGGTGCTCCAAGGAAGCCTACCCAGACTCCAAGTACTGTGAGCGACACATGCACCGTGGCCGCAATCGTTCAAGAAAGCCTGTGGAATCACAAACTATGACACAGTCATCATCATCCACTGTGACATCATTGACAGTAAATGCTGGCAGCAGCAGCAGCAATGCAACTGGAGATTTCCAGAACCTTACTACCACAAATACATATGGTAATCCCCAAGGCACTGGCTCTGGAACAGACCAAACCCACTATGATCTGGAATCCATTCCCTATGGGATCCCAAGTAAAGAATACAGGTATTTTCAAGGATCAAAAGGTGATGGTGGTGAACATAGTTTGTCATCCAAAACTTTTGGAAGCAACAACAAGGTGGATGCCTCTTTGATGCCAATGGGAGTAGCCTCATTCTTGAGATCAAGTAATAATTCCATGTTGCAGGGAGATTATCAGCAGCAACCTTCTTTCTTATGTAGTGAATATGGCTCAGGAGAAACTATGAAGCAAGAGGGTCAGTCCCTTCAACCTTTCTTTGATGAATGGCCTAAAAGCAGGGAATCATGGTGTAGTCTGCAAGATGAGAGATCCAATCACACAAATTTCTCCACCACTCAACTCTCAATATCCATTCCTATGTCATCATCAAATTTCTCTACAACTAGCTCTCAATCCCCACATGGTGAGATTTAA 954 0.4518 MNKSGGGEMSKWPFTVSQWQELEHQALIYKYMVAGLPVPPDLVIPIQNSFHSISQTFLHHPSSAMSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMTQSSSSTVTSLTVNAGSSSSNATGDFQNLTTTNTYGNPQGTGSGTDQTHYDLESIPYGIPSKEYRYFQGSKGDGGEHSLSSKTFGSNNKVDASLMPMGVASFLRSSNNSMLQGDYQQQPSFLCSEYGSGETMKQEGQSLQPFFDEWPKSRESWCSLQDERSNHTNFSTTQLSISIPMSSSNFSTTSSQSPHGEI* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0432 317 MobiDBLite consensus disorder prediction 106 176 - -
Pvu2g0432 317 Pfam WRC 77 119 IPR014977 -
Pvu2g0432 317 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu2g0432 317 MobiDBLite consensus disorder prediction 117 173 - -
Pvu2g0432 317 Pfam QLQ 13 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu2g0432 317 PANTHER GROWTH-REGULATING FACTOR 5 10 309 - -
Pvu2g0432 317 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Pvu2g0432 317 PANTHER - 10 309 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pvu2g0432 317 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0432 Pvu-Chr2 3983255 3986921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0432 1 119 GRF Transcription Factor Family AT3G13960 58.678 2.86e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pvu2g0432 WRC 1.6e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0432 2 3983255 3986921 Pvu2g0432 2 3983255 3986921 ECH