Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0428 ATGGGGGGTGGAGGAGATGCAATTGGGGTGATGAGAGGTCCCAAAGAAGAAGAAGATGCTATTGGAGATGATGAGGAAGAAAAGTGGCCACCATGGCTTAGGCCACTTCTCCAAACAAGTTTCTTTGTTCAATGCAAAGTCCACTCAGATTCCCACAAAAGTGAATGTAACATGTTTTGTTTGGACTGTGTGAATGGAGCCCTTTGTTCTGCCTGTCTTGCTTCTCACAGAGAACACAGAGCTATTCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCAGAGATACAGAAATTTGTGGACATAGCAGGGGTCCAAACTTACATTATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGCAAAGGAGTCACCAACACCTGCCAAGTCTGTGAGCGCAGCCTTCTTGATTCTTTCAGCTTCTGCTCTCTTGGTTGTAAGATAGTTGGAACCTCCAAAAAGTTCCGGAAGAAGAAACTGTTTGCTGAGACAGATGGGTCGGATTGTGAAGAATCAATAAATGGCATCAGCAATGAAAGTGCAAGAAACAAAATCCAAAGCTTCACACCATCAACACCACCACCAACAGTGGTAAATTACAGGTCTGCTAAGAGGAGAAAGGGTGTCCCCCATAGATCTCCAATGGGGGGTGCCCTCATTATAGAATACTACTAA 699 0.4435 MGGGGDAIGVMRGPKEEEDAIGDDEEEKWPPWLRPLLQTSFFVQCKVHSDSHKSECNMFCLDCVNGALCSACLASHREHRAIQIRRSSYHDVIRVSEIQKFVDIAGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKKFRKKKLFAETDGSDCEESINGISNESARNKIQSFTPSTPPPTVVNYRSAKRRKGVPHRSPMGGALIIEYY* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0428 232 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 19 226 - -
Pvu2g0428 232 MobiDBLite consensus disorder prediction 1 26 - -
Pvu2g0428 232 Pfam PLATZ transcription factor 85 156 IPR006734 -
Pvu2g0428 232 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 19 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0428 Pvu-Chr2 3950798 3953185 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pvu2g0428 PLATZ 8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0428 - - gmx:100792668 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0190 11 1482496 1484957 Pvu2g0428 2 3950798 3953185 ECH
Pvu2g0428 2 3950798 3953185 Pvu2g0428 2 3950798 3953185 ECH