Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0423 ATGAGAACACTAAGCAGTGATGAAAGTGGTTTGAAGAAGGGGCCATGGAGCCCAGAAGAGGATCAAACACTAGTGGATTACATTCAGAAGCATGGCCATGGAAGTTGGAGAGCTCTGCCAAAGCTTGCAGGGTTGAACAGGTGTGGAAAGAGTTGCAGACTGAGATGGACTAACTACCTCAGACCTGATATCAAAAGAGGCAAATTCTCTGAAGAAGAAGAGAAACTCATCATCAATTTACATGCAGTTCTTGGGAATAAGTGGGCAGCTATAGCATCTCATCTACCAGGAAGAACAGATAATGAAATTAAGAATCTGTGGAACACACATTTGAGGAAAAAGCTTTTGAAAATGGGGTTAGATCCAATGACTCACCGTCCAAGAACTGATCACCTAAACCTTCTCACCAATCTACACCAGATTTTGGCAGCTGCAAAAATTGTGAGCAGTTTCACAAACCCTTCTGACATAAACAATGCTCTAAGGCTACACTCCAATCTAGCCAAATTCCAATCATTGCAACAAAACATGTTTCAACTCACTGGTGCTTCAAACTCTGAACCACTCAACCCTTTTGCACCATTAAACTCACTGCAAGATGGTTTTGTAAATGATGTTTTGGGGTTGAATCATCACTCTAATCTCCTAAACCTTCAACATGATGATGATTCACTTTTTCAAATGCACCCCAGTTTCCAAAACTTTGAGGCCCTTCAGCAGCCAACACAAGATGGTTCCTTAAATGCTGACCCTTCACCATCAAATTCTCTTCCAAATCTGGTTTCTGCCTCCCCTGAAAGTTCCCCAGTGAAGGAAGCAGAAAAGGTTAATGCAAACTCAAAGGATTGTTCTAACCCTTGTTCCACCACCTTTGAGTTAACATGGGGAGATTTCATGGATGAAGATGCAACAGAAACTTATTGGAAAGGTTTCATAGACCAACATTCTAACCAGACATGGTCAACAGTCCCATGA 975 0.4174 MRTLSSDESGLKKGPWSPEEDQTLVDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSEEEEKLIINLHAVLGNKWAAIASHLPGRTDNEIKNLWNTHLRKKLLKMGLDPMTHRPRTDHLNLLTNLHQILAAAKIVSSFTNPSDINNALRLHSNLAKFQSLQQNMFQLTGASNSEPLNPFAPLNSLQDGFVNDVLGLNHHSNLLNLQHDDDSLFQMHPSFQNFEALQQPTQDGSLNADPSPSNSLPNLVSASPESSPVKEAEKVNANSKDCSNPCSTTFELTWGDFMDEDATETYWKGFIDQHSNQTWSTVP* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0423 324 MobiDBLite consensus disorder prediction 242 266 - -
Pvu2g0423 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Pvu2g0423 324 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Pvu2g0423 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Pvu2g0423 324 CDD SANT 68 111 IPR001005 -
Pvu2g0423 324 PANTHER MYB TRANSCRIPTION FACTOR 1 315 - -
Pvu2g0423 324 CDD SANT 15 60 IPR001005 -
Pvu2g0423 324 MobiDBLite consensus disorder prediction 242 282 - -
Pvu2g0423 324 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Pvu2g0423 324 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Pvu2g0423 324 Gene3D - 68 115 - -
Pvu2g0423 324 Gene3D - 10 66 - -
Pvu2g0423 324 SMART sant 65 113 IPR001005 -
Pvu2g0423 324 SMART sant 12 62 IPR001005 -
Pvu2g0423 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 315 - -
Pvu2g0423 324 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Pvu2g0423 324 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0423 Pvu-Chr2 3907616 3909950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0423 2 313 MYB Transcription Factor Family AT5G16770 47.605 1.62e-93 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu2g0423 Myb_DNA-binding 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0423 K09422 - gmx:102660452 425.246