Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0410 ATGGATCCTTTTGATGATCTTCTACCTGTGGCTTCTGTTGAACGCATTCGGCCGGGTGCGAAGTTTGTTCCGAAGGCCAAACCGAAACAGCGGCGAAAGGAAGTACCTTCATCGGAAAAGGCCACCTCATCTAGAGATGGACTTACTGGGAATGAATGTCAAAATGTAGTTGCTTCGACGCTAAGCGTGCCAGCGGAAGAATCTATGGGATCCATTCATCATACGCAGTTAGAATTTCCAAATTCTGAAAGGGAAGTTCCTAAACAAATTAGTGTTGAGGGAGATGGTGCAGCCTCGGTGCACGATTCCACGTTCACAGATGCTGATCAGAATTCTACATACTTTTTAGAATCAGCATGTGAGGCTGATCCAACAGAATTTGACGGGGACTCAGTCACTAACTTCTTTTCTGAGACCAACCTCAATAATGGCATAACACAACCAGTTCACCCTGCCAATGCTGTAGAAACCAAATTGAATAATGTGACTGCTCCATTTACAACTTGCTCAAACATTGATAGGATGAAGGAACCACCTAAAAATGGGGAAGGTTCATTTCTTGATAGCAACAAATGTTTGGAACTTATTGACAACTCATTGCAAGTTGGCACGGAATTGGGCTTCAAAAGTGCTTCAGATAATAAGGTTGCAATAGTTCAGACCGTTGATTCAAATTCGAACTTCGGAAAAGAACCAGAGTTAGTATCTGCAGAGATTGAATTGGATCCTTTCAGCGATATCCTGCCTGATCTTCCCACTAGGAATGTTCATAAATTTAAACCCAAGATTAAGCCACGACCTAGAGTAGGCAATATGCCGGCTTCTGCTTCAGCAAATGTTATGATGGAAAAATCTGTTGAGTTGCCTACTTTTTCAACAACAGACTTTCAATCTTTTCAGTCTAGTGGTATACTAAACCAAACAACCAGTTTACCTTTGCCAACCTCAGAGATTCTTACGACAAATTATTTGCCCAGTAATTTTGGTGACACAAGCTCAAATGTTCCAATATCTGAAGACAGTAAGAGCTTGGCAGCAGCAACTCCTTCCCAATTGGATTCCCTAAATGCTATGCTTTTAGGGGATGCAGTTCATAATGGTACTAGAGATTGGCCTTCTGCCTTCGGTAAATCATCTGGAGAGGCTACAGACATTTTTTGTGGGCTGGAATCCCTTGATGACTTTCTCGCCCAAGCTACTACTGATACAGGAAAACCAGCTCTTCATTCTTTCAATGAGAAGGGTGCAGAGGAAAATTTTGTCGCACCTGCTTGTAGTTCTATTAACTCTTTTGGGGAATGTGATACTACCCAAGTTCAAAGATGTCCCGAGTATCATACACCTCAAGATCCAGTAACCTTCAATGAAGCTACCATTCTCAATGAGAATGATACTCACACAAACAATAGAATGTCGGAAACAGAGGAAATTGTGGACTTGAATCCCACCTATACAAGAGATGATGTCTTTGATTATCAATCCATGAAATCTGGTGAAGATCCAACTTCTGGAATTCTGGTGCATGAAGACTTGACAAATGCTGCTGACAGTTCCACATTGGCTGACTTTTTGCATGCAAATGATTCAAGGGAAAAAGAAGATGCTAATCAGAGAAAAAAGGATGGCACAGACTCATGTTCTCTGAGGAAGAACAAAAGATCATCTATTGCTGGTGAGGAGGATAATGGTGGTAAAACCTTAAGGCAACGGAGAAAACTAGCAGCTTCTAAACCTGCAAACAGCTCATTGAATGAGGATGTTGAAGATGATAATGACCTTGACCCTCCTTATCATTCTAATGAACACGAACTTGAAGAAAATGATGATGACTGTGAAGTCGATCATTCATCCAAGAAGAAGAGAGGATCAAAGAGTTCACAGAAGAAATCTGTGCCTAAAAGTGGAAAAACGTCTCAAAAGCGTAAGAAGGCTGATGATGATGTACAAAAAACTAAGGAACCACCTAAAAAGTTCTCTCATTCAACCCGACGAAAGAAAAGATGCGTGGACAAGGCTCTGCTGGAAATTCCTGAGGACGAACTTGATCCTCGAACATTGCCTATTAAGGATATTATTTTACTTGCAGAACATAGGGAGCGGCAAGCGAAAAAAGAGGCAATGGCTTCAAATACGACTCCCTCGAATCAAAGTGCTGGAGATTTTCTTCATGAGGCTGGTGCGTATAATGAACAGGAGTTCTCAGGTTCAGAAGATGGTAGAGACCCATATGATGATGATCAAGACAATGAAAGGATTGAATCAACTTCCATTCTATACAATTACCAGACATTAATGGAAAAGAGACCTAGGAGGGGTAAATGGTCAAAACAAGATACTGAAGTGTTTTATGAGGCTATTAGGGAGTTGGGTACCGATTTTTCTATGATACAACAGCTTTTCCCTGATAAAACTCGCCGTCAAATTAAGTTGAAATACAAGAAGGAAGAGCGGGAACATTATTTACGGTTAAGAGATGCTATACATAACCGTTCAAAAGATCATTCTCATTATAAATTGTTGATTGAACGACTGCAACAAGCTTCCACCAAGGAAGAGGAGGTTGTGGACCTAACAGAGGGAACTAATGAGGAGGTTGTGGAGGTTGCAACAACAATTAAGCATGATGCTGATGTTAAAGCACAGGAAGATTCTGTGGCAGCTGAGAGTCCAGAGAAATCTGATGACAGTGAGGATGAATCTCTAAAATGGACTGAGTATAAAAGTCTCTATTAG 2733 0.4102 MDPFDDLLPVASVERIRPGAKFVPKAKPKQRRKEVPSSEKATSSRDGLTGNECQNVVASTLSVPAEESMGSIHHTQLEFPNSEREVPKQISVEGDGAASVHDSTFTDADQNSTYFLESACEADPTEFDGDSVTNFFSETNLNNGITQPVHPANAVETKLNNVTAPFTTCSNIDRMKEPPKNGEGSFLDSNKCLELIDNSLQVGTELGFKSASDNKVAIVQTVDSNSNFGKEPELVSAEIELDPFSDILPDLPTRNVHKFKPKIKPRPRVGNMPASASANVMMEKSVELPTFSTTDFQSFQSSGILNQTTSLPLPTSEILTTNYLPSNFGDTSSNVPISEDSKSLAAATPSQLDSLNAMLLGDAVHNGTRDWPSAFGKSSGEATDIFCGLESLDDFLAQATTDTGKPALHSFNEKGAEENFVAPACSSINSFGECDTTQVQRCPEYHTPQDPVTFNEATILNENDTHTNNRMSETEEIVDLNPTYTRDDVFDYQSMKSGEDPTSGILVHEDLTNAADSSTLADFLHANDSREKEDANQRKKDGTDSCSLRKNKRSSIAGEEDNGGKTLRQRRKLAASKPANSSLNEDVEDDNDLDPPYHSNEHELEENDDDCEVDHSSKKKRGSKSSQKKSVPKSGKTSQKRKKADDDVQKTKEPPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLPIKDIILLAEHRERQAKKEAMASNTTPSNQSAGDFLHEAGAYNEQEFSGSEDGRDPYDDDQDNERIESTSILYNYQTLMEKRPRRGKWSKQDTEVFYEAIRELGTDFSMIQQLFPDKTRRQIKLKYKKEEREHYLRLRDAIHNRSKDHSHYKLLIERLQQASTKEEEVVDLTEGTNEEVVEVATTIKHDADVKAQEDSVAAESPEKSDDSEDESLKWTEYKSLY* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0410 910 MobiDBLite consensus disorder prediction 701 750 - -
Pvu2g0410 910 MobiDBLite consensus disorder prediction 876 904 - -
Pvu2g0410 910 MobiDBLite consensus disorder prediction 638 656 - -
Pvu2g0410 910 CDD SANT 773 814 IPR001005 -
Pvu2g0410 910 MobiDBLite consensus disorder prediction 526 680 - -
Pvu2g0410 910 SUPERFAMILY Homeodomain-like 761 815 IPR009057 -
Pvu2g0410 910 Gene3D - 774 839 - -
Pvu2g0410 910 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 258 895 - -
Pvu2g0410 910 MobiDBLite consensus disorder prediction 18 53 - -
Pvu2g0410 910 PANTHER TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG 258 895 - -
Pvu2g0410 910 MobiDBLite consensus disorder prediction 876 910 - -
Pvu2g0410 910 SMART sant 770 818 IPR001005 -
Pvu2g0410 910 MobiDBLite consensus disorder prediction 734 750 - -
Pvu2g0410 910 MobiDBLite consensus disorder prediction 526 568 - -
Pvu2g0410 910 Pfam Myb DNA-binding like 767 847 IPR039467 -
Pvu2g0410 910 ProSiteProfiles Myb-like domain profile. 766 816 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu2g0410 Myb_DNA-bind_7 9.5e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0410 K15198 - gmx:100792788 1158.28