Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0407 ATGAAGCTGAAAACATACGCTGGTCTTAGTTTCATTGCAACTCTGGCTATTATCTATCATGCATTTAACAGTAGGGGTCAGTTTTATCCGGCAATGGTGTATCTCTCAACTTCCAAGATCAGCTTGGTGCTTCTTCTCAACATGGGTTTGGTCCTAATGTGTATTCTATGGCAATTAACTAAGAAGATTTTCTTGGGTTCCCTCCGTGAGGCGGAGGTTGAGAGGCTAAACGAGCAATCGTGGAGGGAGGTCATGGAAATCCTATTTGCAATCACCATTTTTAGGCAAGACTTCTCTGTCACATTTCTTGCAATGGTCACGGCATTGTTGTTGATTAAGGCTTTGCATTGGTTGGCTCAAAAGAGAGTCGAGTACATCGAGACCACTCCTTCGGTGCCCATGTTGTCGCATGTTCGAATTGTGTCTTTTATGGGGTTCCTTCTTCTCTTAGATAGCCTTTTCTTATACAGTTCTTTGAAGCATTTGATAGAAACTTGGCAGGCTTCAGTTTCACTATTCTTTTGTTTCGAGTACATGATACTGGCAACCACCACTGTGTCAATTTTTGTAAAATATATTTTCTATGTTAGTGACATGCTTATGGAGGGACAATGGGAAAAGAAACCAGTCTTCACTTTTTATCTGGAACTCATTAGGGACTTGCTTCACTTGTCTATGTATATGTGCTTCTTTCTTGTAATTTTTGTAAACTATGGTATTCCCTTGCACCTTATACGGGAGCTGTATGAGACGTTTAGGAACTTCAAAGTCCGTGTTGCAGATTACATACGTTATCGTAAAATCACTTCTAATATGAATGATCGATTTCCAGATGCAACCCCTGAAGAGCTTAATGCAAGTGATGCAACCTGCATTATCTGTCGTGAAGAGATGACTACAGCCAAGAAACTTATATGTGGACATCTTTTTCATGTTCATTGTCTCCGATCATGGCTGGAGCGGCAGCATACATGCCCCACATGCAGAGCCTTGGTTGTACCACCAGAAAATGGAACAACTGTAGGGTCGCAAGGATCACAGGCAGATGGTCAACGGCAGGGAACTGGGCCAGGCAGTGAAAGCACAGCTCAAAATGGGGCTTCGGATAATTTGAGTCGACATCAAGCCAGACTCCAAGCTGCTGCTGCTGCTGCTGCCATATATGAGAAGTCTTATGTCTACCCTTCTGGAAATTCTTTTGTATGTTCTCCTGGGTACACTCTTCACCCTCCGGTGGCTGAATCTACTAATAGTAGTGGAGGGCAGACTTCTGGCGAACATACACAAACACAGTTTCTTACAGCTGGTGGACCAACAAATGAATCTTTTCCTCAAATGCAACATTTCCATTTTCTACCTTCCCAACCACCTGCAGCCCTTGTGAATTATGGAAAGGGGTTTGAAAATGATCCAAATATTCCAAGCTCTCATCTAGAAGCTCATAGAAAACTCCTTCAATGCCAGATTCAGATTCTGCAAAATCAGCTTGAGATTCTGCAGAAGACAAGGTCTGACAGAAGTGTAGACGAGGGCACATCTTCATCAGATAGCAGAGGCAAGAGTATCGTTTGCTCATCTGGATCTGCTCGTGGTTATATTGAGGAGATTCAAGATGGAAAAGCATAA 1626 0.4274 MKLKTYAGLSFIATLAIIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVLMCILWQLTKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPSVPMLSHVRIVSFMGFLLLLDSLFLYSSLKHLIETWQASVSLFFCFEYMILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYMCFFLVIFVNYGIPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVGSQGSQADGQRQGTGPGSESTAQNGASDNLSRHQARLQAAAAAAAIYEKSYVYPSGNSFVCSPGYTLHPPVAESTNSSGGQTSGEHTQTQFLTAGGPTNESFPQMQHFHFLPSQPPAALVNYGKGFENDPNIPSSHLEAHRKLLQCQIQILQNQLEILQKTRSDRSVDEGTSSSDSRGKSIVCSSGSARGYIEEIQDGKA* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0407 541 CDD RING-H2_synoviolin 288 329 - -
Pvu2g0407 541 SMART ring_2 291 328 IPR001841 -
Pvu2g0407 541 MobiDBLite consensus disorder prediction 338 374 - -
Pvu2g0407 541 MobiDBLite consensus disorder prediction 502 524 - -
Pvu2g0407 541 PANTHER RING ZINC FINGER PROTEIN 1 378 - -
Pvu2g0407 541 Coils Coil 482 502 - -
Pvu2g0407 541 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 263 336 IPR013083 -
Pvu2g0407 541 ProSiteProfiles Zinc finger RING-type profile. 291 329 IPR001841 -
Pvu2g0407 541 PANTHER - 1 378 - -
Pvu2g0407 541 Pfam Ring finger domain 290 329 IPR001841 -
Pvu2g0407 541 SUPERFAMILY RING/U-box 271 337 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0407 1 522 C3H Transcription Factor Family AT3G16090 66.288 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0407 K10601 - gmx:100816441 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0407 2 3779474 3785159 Pvu2g0407 2 3779474 3785159 ECH