Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0369 ATGTTCCCCACTTACCTATGTAACTACCACGAACCTTACCTCTTCTCAATCTCACCTTATATAACATCACATCACACACATCTTCACTCTCAAACTTTCACCAATCAGATTGCACCAAACGCTTTACTACAAACAAGAAAAAAAAAACTCTGTTTTCATTCCATGGAACAAGAACCAACAAGCACCATGCAACAATGTGGAATAGCCCCAACAACGTCAAAAACGACAACATCGTATCATGGTGTTCGACAGCGAAAATGGGGCAAATGGGTGTCGGAGATTCGTGAGCCGGGGAAGAAAAGCAGAATATGGTTAGGGAGCTATGAGTCGCCGGAGATGGCGGCGGCAGCATATGACGTGGCGGCGTTGCACCTCAGAGGACGCGCCGCCAAACTCAATTTTCCTGAACTTGCGGAGACACTGCCACGTCCCGCCAGCTCCAAATCCGAGGATGTACAGATGGCAGCACAACAAGCTGCATTGAGGTTCACTAGGTCACCAACAATGTCACATAATCAAATATGTATGAGTGAAACAAGTAACAGTAACAGTAACAGTAGTGGTGTGGTTCCTCTGCAAGTGGGACTTTCAGCTACCCAAATTCAAGCTATAAATGAGTCTCCATTGGAGTCACCAAAGATGTGGATGATGCAAATGGCAGAGACACCTAGGTTTGGGTTTGGTGATGAGTACTCCATGATGATGGTGTCTTGTGATGGTGATGATGGTTATGGCATGGAGTTGAGTGGATGGGAAGAAATGCATCATGAATCCTTATGGGACTCTCCTGAATATATGTGA 801 0.4557 MFPTYLCNYHEPYLFSISPYITSHHTHLHSQTFTNQIAPNALLQTRKKKLCFHSMEQEPTSTMQQCGIAPTTSKTTTSYHGVRQRKWGKWVSEIREPGKKSRIWLGSYESPEMAAAAYDVAALHLRGRAAKLNFPELAETLPRPASSKSEDVQMAAQQAALRFTRSPTMSHNQICMSETSNSNSNSSGVVPLQVGLSATQIQAINESPLESPKMWMMQMAETPRFGFGDEYSMMMVSCDGDDGYGMELSGWEEMHHESLWDSPEYM* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0369 266 ProSiteProfiles AP2/ERF domain profile. 78 135 IPR001471 GO:0003700|GO:0006355
Pvu2g0369 266 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF022 74 221 - -
Pvu2g0369 266 Gene3D AP2/ERF domain 78 136 IPR036955 GO:0003700|GO:0006355
Pvu2g0369 266 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 74 221 - -
Pvu2g0369 266 Pfam AP2 domain 78 127 IPR001471 GO:0003700|GO:0006355
Pvu2g0369 266 SUPERFAMILY DNA-binding domain 78 136 IPR016177 GO:0003677
Pvu2g0369 266 CDD AP2 79 137 IPR001471 GO:0003700|GO:0006355
Pvu2g0369 266 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Pvu2g0369 266 PRINTS Ethylene responsive element binding protein signature 117 137 IPR001471 GO:0003700|GO:0006355
Pvu2g0369 266 SMART rav1_2 78 141 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0369 Pvu-Chr2 3561530 3562521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0369 77 261 AP2-EREBP Transcription Factor Family AT1G71450 49.730 4.04e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu2g0369 AP2 2.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0369 - - pvu:PHAVU_002G036000g 543.117