Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0368 ATGGAAATGCCATCTTCAAGCTCGACCCATGTTGGTGCTGCTTCTTCTGCGTACAGAGGAGTGCGCAAGAGAAAATGGGGCAAGTGGGTATCCGAAATCCGCGAACCCGGAACCAAGACCCGAATTTGGCTCGGGAGCTTCGAGACGCCGGAGATGGCCGCCGCCGCCTACGACGTGGCGGCGCTGCATTTCCGGGGCCGCGACGCGCGGCTCAATTTCCCCGAGCTCGCCAGCACGCTGCCGCGCCCCGTGAGCAACAATGCGGACCACATACGCATGGCGGCGCACGAGGCGGCGCTGCGGCTCCGGACCAACCCCGCCGCCGCGGAAACAGGAGGCGGCTCCTTGACGGCGCCGCCGCTGACAGTGAGACTCTCCCCCACTCAGATTCAGGCGATCAATGACTCGCCCATGGACTCTCCTCAGACGTGGATGCAAATGCCTGACACTTTCATGATGCATGATCAATCCATGATGTTCGCAAATGGGTATGCCTTTGAAGACAATGAGTGGGAGAATATGCAGAGTGATTCTCTCTGGGATCCTTAG 549 0.6011 MEMPSSSSTHVGAASSAYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGRDARLNFPELASTLPRPVSNNADHIRMAAHEAALRLRTNPAAAETGGGSLTAPPLTVRLSPTQIQAINDSPMDSPQTWMQMPDTFMMHDQSMMFANGYAFEDNEWENMQSDSLWDP* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0368 182 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Pvu2g0368 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF021 8 181 - -
Pvu2g0368 182 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Pvu2g0368 182 Gene3D AP2/ERF domain 17 75 IPR036955 GO:0003700|GO:0006355
Pvu2g0368 182 CDD AP2 16 76 IPR001471 GO:0003700|GO:0006355
Pvu2g0368 182 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Pvu2g0368 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 181 - -
Pvu2g0368 182 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Pvu2g0368 182 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Pvu2g0368 182 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0368 Pvu-Chr2 3545434 3545982 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0368 16 182 AP2-EREBP Transcription Factor Family AT1G71450 62.791 3.84e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu2g0368 AP2 3.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0368 - - gmx:100815719 342.428