Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0356 ATGGGGTGCATCTGCTCAAAAGACTCCTCAAACAAATACAGAGTTGATGAATATGAGAAAGAGAAAGAGAAAGAAAAGGAATCGAACAAGTCTTCAGTACAACTGGTTGCTCCTTCTGTCTCAACTGCACAGTTAGATATTAGTAATAGCAGGGATGGTTCGGTGCCCCGAATGATTCATTCATCATCACAATCAATCAGAGGAACTGCCAAAGTGGCCTCAGATGATAAAAGCAACCACTTAGATGCCACAAAAATCCAGCACCAGAAGTGTATGACAGTGAGTTCTGGTGTAGATGAAAAATTGCCAATGATGAGCAGAATACTTAGCGTGCAGCATATTGCAGGAGGACAAGTTGATTTGGGATGGCCTGTTTGGTTATCTTCAGTGGCAGCAGAAGCCATCAAAGGGTGGGTGCCTCGAAGGGCAGACTCTTTTGAAAAATTAGACCAAGTTGGACAAGGGGCTTATAGTACTGTGCATAAAGCTCGTGACCTTGAGACAGGTAAAATTGTGGCTTTGAAGAAGGTTCGGTTTTCAAGTGCAGATATGGAAAGTGTTCGGTTCATGGCAAGAGAAATCTATATTATGCGTCAACTTGACCATCCTAATGTCATGAAGCTTGAGGGTCTTGTCACCTCAAGAACATCCACCAGTTTGTACCTTGTTTTTGAATACATGGAACATGACCTTGCTGGGCTAGCAACTACACATGGCTTGAAGTTAACTGAACCACAGATAAAATGTTTTATGCAGCAGCTGCTTCGTGGGCTTGAGCATTGCCACAGTCGTGGTGTGTTGCACCGTGACATCAAGGGTTCAAATCTTTTGGTTGACAACAATGGAAATCTCAAAATAGGAGATTTTGGTCTTTCAACAGTATATGAACCTGAAAAAAAGCAGCCATTGACTAGCCGTGTTGTGACTCTGTGGTATAGAGCACCTGAGCTTTTGCTGGGTGCTACAGAGTATGGAGATGCAATTGACTTGTGGAGTGTTGGTTGCATTCTAGCCGAATTGCTAGCGGGGAAGCCGATCATGCCTGGAAGAACAGAGGTGGAACAAATGCACAAAATTTTTAAACTTTGTGGTTCGCCATCTGAAGACTATTGGCAGAAAACAAAACTTCCTCATGCAACAAGTTTTAAGCCACAACACCCTTACAACCGCCAAGTGTCTGAAACATTTAAAAATCTTTCTCCCCCGGCATTGGCTCTTGTTGATAAGCTCCTAACAATAGAACCAGAAGGTCGAGGATCAGCAACTTCTGCACTGGAAAGTGAGTTCTTCACTACAAATCCCTTACCTTGTGATCCCTCAAGTTTACCAAAGTTTTCACCAAGCAAGGAGTTTGATTCCAAGCGTCGAGACAAGGAAGCTACAAGGAAAAACCAGGAAGCTGTTAGAGGACGTGCACCAGCATCTGTTCTTAGGGGAGCAGGAGATACCAAGGCATTGGGTTCACCACAGTACAATGCTCATGGAAATATATCTATGCGGAGGAAACCAAATACTTCAATGTACCGTCAAAAATATTTATGCCAGGAGAATGGGGAACCCAATGAAAATGGTGGAGGCATAGTAAGTGTACATGGTGGCTACACGCATGCTACTACCATGATGCACAACAGTGTAGCAGGATCATCCTCAGTGTGTAAGAGACCAGAATCATATTTGACCAATCAGAGGTCTCATTTGAATCAAGCAACAGCAAATTTATGTACCTCTTCCGTCAAAAAGGAACCAGGCTCGTCTGCTCGTGAATCCAGCATGGGTCCTATGCCGAAGAAAAATAGGATACACTGCTCTGGACCATTGATGCGTCCGGGTGGAAACCTTGATGATATGCTTAAAGAGCATGAGAAATTAATGCAAGATGTTTTCCGTAGCGTCAAAAAGGCCAATCCGTAA 1911 0.4354 MGCICSKDSSNKYRVDEYEKEKEKEKESNKSSVQLVAPSVSTAQLDISNSRDGSVPRMIHSSSQSIRGTAKVASDDKSNHLDATKIQHQKCMTVSSGVDEKLPMMSRILSVQHIAGGQVDLGWPVWLSSVAAEAIKGWVPRRADSFEKLDQVGQGAYSTVHKARDLETGKIVALKKVRFSSADMESVRFMAREIYIMRQLDHPNVMKLEGLVTSRTSTSLYLVFEYMEHDLAGLATTHGLKLTEPQIKCFMQQLLRGLEHCHSRGVLHRDIKGSNLLVDNNGNLKIGDFGLSTVYEPEKKQPLTSRVVTLWYRAPELLLGATEYGDAIDLWSVGCILAELLAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWQKTKLPHATSFKPQHPYNRQVSETFKNLSPPALALVDKLLTIEPEGRGSATSALESEFFTTNPLPCDPSSLPKFSPSKEFDSKRRDKEATRKNQEAVRGRAPASVLRGAGDTKALGSPQYNAHGNISMRRKPNTSMYRQKYLCQENGEPNENGGGIVSVHGGYTHATTMMHNSVAGSSSVCKRPESYLTNQRSHLNQATANLCTSSVKKEPGSSARESSMGPMPKKNRIHCSGPLMRPGGNLDDMLKEHEKLMQDVFRSVKKANP* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0356 636 MobiDBLite consensus disorder prediction 47 72 - -
Pvu2g0356 636 MobiDBLite consensus disorder prediction 15 35 - -
Pvu2g0356 636 MobiDBLite consensus disorder prediction 432 504 - -
Pvu2g0356 636 ProSiteProfiles Protein kinase domain profile. 146 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0356 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Pvu2g0356 636 CDD STKc_CDK9_like 146 430 - -
Pvu2g0356 636 MobiDBLite consensus disorder prediction 15 30 - -
Pvu2g0356 636 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Pvu2g0356 636 Pfam Protein kinase domain 146 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0356 636 SUPERFAMILY Protein kinase-like (PK-like) 139 438 IPR011009 -
Pvu2g0356 636 MobiDBLite consensus disorder prediction 47 75 - -
Pvu2g0356 636 Gene3D Phosphorylase Kinase; domain 1 133 228 - -
Pvu2g0356 636 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 73 631 - -
Pvu2g0356 636 MobiDBLite consensus disorder prediction 489 504 - -
Pvu2g0356 636 PANTHER CELL DIVISION PROTEIN KINASE 73 631 - -
Pvu2g0356 636 MobiDBLite consensus disorder prediction 448 466 - -
Pvu2g0356 636 Gene3D Transferase(Phosphotransferase) domain 1 229 470 - -
Pvu2g0356 636 SMART serkin_6 146 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0356 636 Coils Coil 15 35 - -
Pvu2g0356 636 MobiDBLite consensus disorder prediction 577 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0356 Pvu-Chr2 3483634 3488536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0356 138 469 Core Cell Cycle Gene Families AT5G10270 51.149 2.10e-119 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pvu2g0356 Pkinase 3.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0356 K08819 - gmx:100791743 983.786