Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0336 ATGGATCAGTCGCCACCTTATTATAACCGATTTCCTCAGACTCCAAACTCAACGAAGAAGGGACGCAGTGGTTATGAGCCATCGGACACTGAGACCGAGTGGCAAGAGATTCCACGCCACGAAAGAGAAAGAAGAAACTTCACTTTAAAAGAAACAAAAGCACTTACTCTAATGAACAAAAGTCCCATGGCAGCACTACACAGAAGGCACCCTTCCAGGGTTGAACATCAAATCTCATCAGCTTCAACAGCTTCAGTTCCACGTAGAAGACACAATAGCAAATCACCCTATAAACTTCCCGTGGCAGAAGATTTTGCTGCTTCATCAGGTTTGGATACACGCAGAAATATAAGTCCCTTGCCGAGACCTGACCTTGGAAGAACTGTGTCCCCTTTCAGGGAGCAAAGAACTGAGAAGCCGCACAACAAGAGATCAGTGACTGCTCCCAGATTGAGGATTCAAGAGAGCAGCCATGGAGGGATAAGCAATGACACTGTTCCAAAGCAAAGAGGAGTTTCTCCTTTCAAAGCGCCTTCGGTTGGAAAAATCAACGAAATGATAGCACAGGTGAAGCTATCTAAAGATCCCAGAAGTGATTATTCATCGGTGCTTGAAAGCACTGATTCCATTCAACCCGGTGACCTTTTCTTTTCTCGTGAATGCAATGCCTTGCAAGGGAGGAATTCTTCGTTGCCAAAACGCCTCCAACAGTGCGAGTATTTCAGTCCAAGGCCAACGGTGAACGCCACGAGAACCCCATCTGAATGCAAAGGAAATAATGGTGATCTTAACATGAATATCTTGTCTCAATCAACCACGGGTGTGAGTTCTGGTTCCACGAGTAGAAAGGGCAGTGGCACTGGGAAGCCAAGTAGTGTAACAAGCGAAGGTAGTGGAAAGACAAGTGCAAGCATGAGGAAATTCACAGCTAACAGACAAAAGAACCAGAAAGATACATGGTTTGCTTGCATGAGAACAGGTAACTGTAGAACCACTACAAAATCTCCTGAACGTCGACCTATTGACGAATCTTCTTACATTGAGAGAGCAGTGGTAGTGGAAAGCCTCCCACAATTCTTGGCAGATAAGCACCAACCTGCTTCACTTAATGGCTTCATTTGCAACAGACAAGAAGCTCAACTTCTGAAGGAATTGGTGTCTCATGGCTCTTGCCCTCATATTTTGCTCAAAGGACCCTCTGGTTCCGGGAAAAGAGAGCTAGCAATGGCTCTTCTTCGAGAAATATATGGTGATGCATGTTGTAATTTATCTCATGATCTAAGACACTTCCCTATTCAGGATCAAAGGCTTAAGAAAGTGTCTGTCCCCATAACATCAAGTCCTCATCACATGGAGCTAGATGTAAATTCTGAACCAAATGCTAAATATGCTTTAATGGGATTAATCAAAGAAATTAGCAATATATATGCGATTGCCCCTGAAGTCAGCAATATTAATTTCAAGTCAGATTTTAAAGTAATGGTTCTTTATGAGGTCCACAAAGCAGTAGATAACATCCAGCACATTATCAAATGGATTGTAGACCGCTATTCGGATGTATGCAAATTAGTACTCTGCTGTGAAGATGATGCAGACATTATTGAACCTGTAAAAAATCGGTTCAAAACTATCCAAGTTGATGCTCCTCAAACTCACGAAGTTGTTGAGGTTCTTATGCAGATAGCAAAGAATGAGAATTTTGATCTGTCCATGAACTTTGCTGCGAAGATTGCAACAAAATCTAAGCAGAACCTCAGAAAAGCAATCATGGCTCTTGAAGCATGCAAAGCACACAACTATCCATTTTCAGAAGAACAACCAATTTCAGTTGTATGGGAGGAGATCGTAATAGAAGTTGCCACAGAAATCCTGGCTGATCCATCATTTTCACGCTTACTCTCAATTCGAGGGAAATTTCAAATGCTTCTCTTAGATTTTGTCCAGCCGAAATTGATTCTCCAGAAACTCGTAGAACATCTCCTAGAAAGAATTGAAGCCAACTTAAAAAGAGAGTTATACTACTGGCATGCCTATTATGACAGAAGACTTCCACCAGGAATAGCAGCTTTACTAAAATTAGAAGAATTTGTGGCGAAGTTCATGAGCATGTGCAGAAAAAACTCTGGCAATCGGCAATATGTGTAG 2145 0.4219 MDQSPPYYNRFPQTPNSTKKGRSGYEPSDTETEWQEIPRHERERRNFTLKETKALTLMNKSPMAALHRRHPSRVEHQISSASTASVPRRRHNSKSPYKLPVAEDFAASSGLDTRRNISPLPRPDLGRTVSPFREQRTEKPHNKRSVTAPRLRIQESSHGGISNDTVPKQRGVSPFKAPSVGKINEMIAQVKLSKDPRSDYSSVLESTDSIQPGDLFFSRECNALQGRNSSLPKRLQQCEYFSPRPTVNATRTPSECKGNNGDLNMNILSQSTTGVSSGSTSRKGSGTGKPSSVTSEGSGKTSASMRKFTANRQKNQKDTWFACMRTGNCRTTTKSPERRPIDESSYIERAVVVESLPQFLADKHQPASLNGFICNRQEAQLLKELVSHGSCPHILLKGPSGSGKRELAMALLREIYGDACCNLSHDLRHFPIQDQRLKKVSVPITSSPHHMELDVNSEPNAKYALMGLIKEISNIYAIAPEVSNINFKSDFKVMVLYEVHKAVDNIQHIIKWIVDRYSDVCKLVLCCEDDADIIEPVKNRFKTIQVDAPQTHEVVEVLMQIAKNENFDLSMNFAAKIATKSKQNLRKAIMALEACKAHNYPFSEEQPISVVWEEIVIEVATEILADPSFSRLLSIRGKFQMLLLDFVQPKLILQKLVEHLLERIEANLKRELYYWHAYYDRRLPPGIAALLKLEEFVAKFMSMCRKNSGNRQYV* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0336 714 MobiDBLite consensus disorder prediction 24 50 - -
Pvu2g0336 714 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 170 713 - -
Pvu2g0336 714 CDD AAA 375 415 - -
Pvu2g0336 714 MobiDBLite consensus disorder prediction 1 23 - -
Pvu2g0336 714 MobiDBLite consensus disorder prediction 76 90 - -
Pvu2g0336 714 Gene3D - 551 608 - -
Pvu2g0336 714 MobiDBLite consensus disorder prediction 149 169 - -
Pvu2g0336 714 Gene3D - 611 704 - -
Pvu2g0336 714 MobiDBLite consensus disorder prediction 246 313 - -
Pvu2g0336 714 SUPERFAMILY post-AAA+ oligomerization domain-like 611 703 IPR008921 GO:0003677|GO:0006260
Pvu2g0336 714 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 597 IPR027417 -
Pvu2g0336 714 MobiDBLite consensus disorder prediction 1 177 - -
Pvu2g0336 714 Gene3D - 358 549 IPR027417 -
Pvu2g0336 714 PANTHER OS02G0704966 PROTEIN 170 713 - -
Pvu2g0336 714 MobiDBLite consensus disorder prediction 129 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0336 Pvu-Chr2 3305083 3308769 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0336 361 703 Core DNA Replication Machinery Family AT5G27740 38.617 1.78e-75 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0336 K10756 - gmx:100795321 1221.07