Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0329 ATGTTTCATTCTTTCCTTTTCTTTTATGCTTTGGTTCTCATCTCTTGCTTTCCTCGTCATTTGCCATCGTTAACTGTGTTTTTCTTTCATGTAGGTCACTTGGAGCATTTTTTTTCTCGGCAAAATCTTGCGTCCATTGAGAAATTTCACTCATTTCTTGAATTTGGCCAAAAGGGTGGGATTTTGCAAAACTTTGCAAAGATGAATGATTTGATGACAAAATCGTTCCTAAGTTATGTGGAACTTAAGAAACAGGCAAAGAAGGACCGTGAAGACGATCTTGACATTGAGACAGGGAGACTCAAACCCACAGAAGACCGCAACCTCTCTCAGTTCTTCCAAGAAGTTGAAGCGATCAAGGTTGAAATGGAAGAGATTACCAATCTCTTATTTGATCTTCAGCAACTGAATGAAGAGGCAAAGTGCACCCACAGTGCCAAAGTTCTTCGTGGCCTAAGGGACCGGATGGAGTCTGACATGGTTGCCGTGCTTCGCAAGGCACGGATCATCAAGGCAACGCTTGAGGTTCTTGACAAATCCAACATGGTCAATCATAATTTGTCAGAAATGTACAAAGAGGGGAGCCCCATTGACAGGACCAGAATATCTGTCACAAATGGTTTGAGGGTCAGGCTTAGGGCAATGATGAATGATTTTCAGTCCTTGAGAGACCAAATTCTATCTGATCACAAGGAAGATTTGAAGAGAAGGTACTACACAGCAACGGGTGAGGTTCCCTCTGAGGAGGTCATGGAGAAGATGGTTTCTGGGAGTCTCAAAGTGGAGTTTTTGGCTGGGAAAACGGATGCAGAATTGGACACTCAAGTTAGGCATGAGGCAGTGATGGATATCCAGAGGAGTTTGAATAAGCTTCACCAGGTTTTTCTTGATATGGCTGTTCTGGTTGAGACACAGGGAGAAAGCGTGGATAACATTGAGGAGAATGTGGCTAATGCGGGTAACTTCATCCATGGTGGAACTAATAGTCTCTACTATGCCAGCCAGATGAAGAAAAAGAACAGAAAGTGGGTCTGTTGGGCTTTTGCTGTGGGGCTGATTATTCTACTCGTATGCATAGTTGCAATGTTGTCTTCTTGA 1098 0.4326 MFHSFLFFYALVLISCFPRHLPSLTVFFFHVGHLEHFFSRQNLASIEKFHSFLEFGQKGGILQNFAKMNDLMTKSFLSYVELKKQAKKDREDDLDIETGRLKPTEDRNLSQFFQEVEAIKVEMEEITNLLFDLQQLNEEAKCTHSAKVLRGLRDRMESDMVAVLRKARIIKATLEVLDKSNMVNHNLSEMYKEGSPIDRTRISVTNGLRVRLRAMMNDFQSLRDQILSDHKEDLKRRYYTATGEVPSEEVMEKMVSGSLKVEFLAGKTDAELDTQVRHEAVMDIQRSLNKLHQVFLDMAVLVETQGESVDNIEENVANAGNFIHGGTNSLYYASQMKKKNRKWVCWAFAVGLIILLVCIVAMLSS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0329 365 SUPERFAMILY t-snare proteins 107 326 IPR010989 GO:0016020|GO:0016192
Pvu2g0329 365 Gene3D - 267 364 - -
Pvu2g0329 365 Gene3D - 104 235 - -
Pvu2g0329 365 PANTHER SYNTAXIN 71 361 IPR045242 -
Pvu2g0329 365 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 271 333 IPR000727 -
Pvu2g0329 365 CDD SynN 109 259 IPR006011 GO:0016020
Pvu2g0329 365 Coils Coil 119 139 - -
Pvu2g0329 365 Pfam Syntaxin 111 306 IPR006011 GO:0016020
Pvu2g0329 365 Pfam SNARE domain 309 357 IPR000727 -
Pvu2g0329 365 CDD SNARE_syntaxin1-like 273 330 - -
Pvu2g0329 365 SMART SynN_4 104 231 IPR006011 GO:0016020
Pvu2g0329 365 SMART tSNARE_6 266 333 IPR000727 -
Pvu2g0329 365 PANTHER SYNTAXIN-112 71 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0329 Pvu-Chr2 3266161 3267456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0329 68 365 SNARE and Associated Proteins AT2G18260 59.283 2.63e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0329 K08486 - gmx:112997615 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0329 2 3266161 3267456 Pvu2g0329 2 3266161 3267456 ECH