Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0322 ATGAGAACGGATATTGTTGAAGGGGAGGCCTTACTAAATCCCAGCTCCTTTAAGGTGCATAGTAAAATCTGCATAGAACTTGCAAAATTAGTGGATAGAATCTCAATAATAGTTCCAGACATAGAGGCGACAAGGCCAGGATTCTCATTGGGAATAGAGTCTCTGTGTTTGCTGAACAACGCAATTGAAAAGGCTAAAGTACTTCTGCAGCATTGCTCTGAATGCAGCAAACTCTATCTGGTTATGACAGGGGATACAGTACTCTCAAGATGCCTAAAGACAACAAGATCGTTAGAGAAAAGCTTAATCCAAATTCAGAATATGGTTCCTGTTATGTTGGCTGTGAAGGTTTCTGGAATAATTCATGATATTGAGTGTACGAGATTTGTTCTGGACCCCGATGAAGAAGAGGCTGGGAGGGTTGTGAGAGAGTTGCTCGGTTCAACCTCAGATTCAGTCAACGATTCTGAAGTTGAAGCTCTTCAGTCTGCAGCATCTCGACTGAAAATAACATCCCGGAAGGCCATCGTAACAGAGCAACGATCTATTAGGAAGTTGTTGGATAAACTTGGACCACATGACGTGACGAAGAAAAGGATGATACTGAAATATCTTCTGCATCTACTGAAAAAGCATGCAAAGCTCCTGGTGGTAGAACATGAGGAGAGGGTCTATTCTTCCGAAGAACAAGTTGTAACACAGAAATCTAGTCACGATTCTCTACGAAGCCATCATGTGGAATCAGACCAAAGCTTAAACTATGGTCAATATATAACTCACACCAGTGAGTTGGGTGGAGTTGAACCCCCTGAGCAATTTAAGTGCCCAATATCCTCAAGGTTGATGTATGATCCTGTTATCATTGAGTCTGGAGAAACATATGAAAGGATGTGGATAAAAAAGTGGTTTGATGAGGATAATGACATATGCCCCAAAACCAGAAAGAAACTAGTCCATACGGCTTTGACTCCAAACGTGTCCATGAAGAACCATATATCAAAGTGGTGCAGAAAAAATGAAGTCTCTATTCCAGATCCTAGTAGGCATGAAGAAGATATTCGCTCATGGGAAGCTTCAAGCACTTCCATTAATAGTATAGGAAGTTATTTCAACGACTTCAACTCGCCAGTGGATCTCAGTAGCATGTCAATTGGGTCACTTGATACTAGTTTTTGTTCAGATGCCTCGCATGGTAAGACCACTCGTGGCTCTTTGTTGATCAAGAGCAGTGACAATTCTGAAAGACATCAAGTTCATGCAGAGATACAAGATAGTGATTTGATGCTCTTGCCTCAACTCCGTGATTTTCAATGGGAATCTCAATGCAAGGTCATTCAAGACCTGAAAGATCACTTGAAAAGCAATAGCCAAGCTTTTGTTTCTGTACCAGCAGAAAATTTGGTTGAACCACTCCTCAGATTTCTGAGCAATGCATATGATCTGCGTGATGTTCAAGCCTTGAGAGCTGGAACTCAGCTTCTGTTGGACTTTGTCAACAACTGCAGAAATGGTAATACTACTTTGAATGATGATGCGTTCATTATGTTGGCGAGTTTTCTTGATTCAGAAGCGATAGAAGAAATTCTTGTCATACTGGAAGAACTGTCAGGATATCGGTTTAGTAAACCTAAAATTGCAGCATCAAGTGCTCTCAATTCAATTTTAAACATACTTGATTCCGAAAACAAAGGTTTCCAACAACGAGCCATTAGAATAATGTACAATTTGTCTTTCATTAGTGAAGTCTGTCCCAGCATGCTATCACTCAAGTGCATCCCAAAATTGCTGCCATTTTTCAAAGACAGAACCCTTTTGAGATACTGCATATATATATTGAAAAATCTGTGTGATACTGAAGAGGGTAGGAATTCTGTTGCTGAAACAAAGGGATGCATAACTTCTGTGGCTGAAATACTTAATTCAGGCAATAATGAAGAACAAGAACATGCACTGGCAGTTCTAGTCTCTCTATGCTCTCATGTGGATTATAGTAAGTTAGTAATGAGAGAGCATGAGAATATCATAACTTCTCTTTGCCTGATCTCCCAGAATGGAAACGATAAAGGAAAGAAAAGTGCGATGGAATTGATCTATATTTTGAATGGTGTCAACATTGTTGACAATAAAGGTTGCCCTGAACCAAATATCAGCAACTCTTGTCGAGATTCCATCAGTCACCCACCTGAAGAAAGTAGACCATCAAAGAGATCCACGTTTTTGAAGAAACTATCACCATTTTCAAAGTCCAGTTCACATGCATCAAAAACCAAAAGATGA 2277 0.3996 MRTDIVEGEALLNPSSFKVHSKICIELAKLVDRISIIVPDIEATRPGFSLGIESLCLLNNAIEKAKVLLQHCSECSKLYLVMTGDTVLSRCLKTTRSLEKSLIQIQNMVPVMLAVKVSGIIHDIECTRFVLDPDEEEAGRVVRELLGSTSDSVNDSEVEALQSAASRLKITSRKAIVTEQRSIRKLLDKLGPHDVTKKRMILKYLLHLLKKHAKLLVVEHEERVYSSEEQVVTQKSSHDSLRSHHVESDQSLNYGQYITHTSELGGVEPPEQFKCPISSRLMYDPVIIESGETYERMWIKKWFDEDNDICPKTRKKLVHTALTPNVSMKNHISKWCRKNEVSIPDPSRHEEDIRSWEASSTSINSIGSYFNDFNSPVDLSSMSIGSLDTSFCSDASHGKTTRGSLLIKSSDNSERHQVHAEIQDSDLMLLPQLRDFQWESQCKVIQDLKDHLKSNSQAFVSVPAENLVEPLLRFLSNAYDLRDVQALRAGTQLLLDFVNNCRNGNTTLNDDAFIMLASFLDSEAIEEILVILEELSGYRFSKPKIAASSALNSILNILDSENKGFQQRAIRIMYNLSFISEVCPSMLSLKCIPKLLPFFKDRTLLRYCIYILKNLCDTEEGRNSVAETKGCITSVAEILNSGNNEEQEHALAVLVSLCSHVDYSKLVMREHENIITSLCLISQNGNDKGKKSAMELIYILNGVNIVDNKGCPEPNISNSCRDSISHPPEESRPSKRSTFLKKLSPFSKSSSHASKTKR* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0322 758 Pfam Kinesin-associated protein (KAP) 482 658 - -
Pvu2g0322 758 Pfam U-box domain 270 340 IPR003613 GO:0004842|GO:0016567
Pvu2g0322 758 SUPERFAMILY ARM repeat 429 700 IPR016024 -
Pvu2g0322 758 Gene3D - 428 724 IPR011989 -
Pvu2g0322 758 PANTHER U BOX DOMAIN-CONTAINING 9 727 - -
Pvu2g0322 758 SUPERFAMILY RING/U-box 258 346 - -
Pvu2g0322 758 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 9 727 - -
Pvu2g0322 758 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 267 343 IPR013083 -
Pvu2g0322 758 MobiDBLite consensus disorder prediction 717 758 - -
Pvu2g0322 758 ProSiteProfiles U-box domain profile. 268 342 IPR003613 GO:0004842|GO:0016567
Pvu2g0322 758 SMART Ubox_2 272 335 IPR003613 GO:0004842|GO:0016567
Pvu2g0322 758 CDD RING-Ubox_PUB 273 315 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0322 Pvu-Chr2 3234986 3240388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0322 1 704 U-box Gene Family AT4G36550 37.291 1.66e-138 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0322 - - gmx:100791627 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0322 2 3234986 3240388 Pvu2g0322 2 3234986 3240388 ECH
Pvu3g2621 3 48256664 48262181 Pvu2g0322 2 3234986 3240388 ECH
Pvu2g0322 2 3234986 3240388 Pvu3g2621 3 48256664 48262181 PCT