Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0321 ATGGCATCATCTTGGACTCCAAGGCAAAACAAACTATTTGAAGAAGCTCTTGCTACATATGACAGAGACACCCCTGACAAATGGCAGAATGTGGCAAGAGTAGTTGGAAAATCCGTTGAAGAAGTTAAAAGGCACTTTGAGATCCTCAAAGAAGATGTCAAACGCATTGAGCGTGGACAGGTCCCATTGCCTAATTACACAGGTTCTTGA 210 0.4286 MASSWTPRQNKLFEEALATYDRDTPDKWQNVARVVGKSVEEVKRHFEILKEDVKRIERGQVPLPNYTGS* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0321 69 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 67 IPR044636 GO:0003700
Pvu2g0321 69 SMART sant 1 52 IPR001005 -
Pvu2g0321 69 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Pvu2g0321 69 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 67 - -
Pvu2g0321 69 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Pvu2g0321 69 CDD SANT 4 50 IPR001005 -
Pvu2g0321 69 Gene3D - 2 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0321 Pvu-Chr2 3219506 3221207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0321 - - pvu:PHAVU_003G254400g 119.012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2619 3 48232266 48233623 Pvu2g0321 2 3219506 3221207 ECH
Pvu2g0321 2 3219506 3221207 Pvu2g0321 2 3219506 3221207 ECH
Pvu11g0461 11 3874859 3876374 Pvu2g0321 2 3219506 3221207 ECH
Pvu2g0321 2 3219506 3221207 Pvu3g2619 3 48232266 48233623 ECH
Pvu2g0321 2 3219506 3221207 Pvu3g2620 3 48243523 48244598 PCT