Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0305 ATGTCTGACTCACATCTAACTTTCTACTCTCCTTCTTCCATTCTTGCTCTTCTCCCACTCTTCTTCATCTTCTTCATTCTTATCAAAAGAAAGCAAACCAAACCCAGGCTCAACCTTCCCCCAGGTAACATGGGCTGGCCATTCCTTGGTGAAACCATTGGCTATTTAAAGCCTTATTCTGCCACCACCATAGGGGAATTCATGGAGAAACACATAGCAAGGTATGGTACAATCTACAAGTCCAAGCTATTTGGGGAGCCGGCAATAGTGTCAGCAGATGCAGGACTCAACAGGTTCATTCTGCAGAACGAAGGGAAACTGTTCGAATGCAGCTATCCGAGAAGCATTGGCGGAATACTCGGGAAATGGTCCATGTTGGTCTTAGTCGGCGACATGCATAGAGACATGCGGGTTATATCACTCAACTTTCTGAGCCACGCCAGGCTCAGAACCCACCTCCTGAAAGAGGTGGAGAAACACACCCTCTTGGTTCTAAACTCTTGGAACCAAAATTGCACGTTCTCAGCCCAAGATGAAGCCAAGAAGTTCACCTTCAACCTGATGGCTAAGCATATCATGAGCATGGATCCTGGGGAAATCGAGACAGAGCAACTAAAGAAAGAGTACGTCACTTTCATGAAAGGGGTGGTATCCGCGCCATTGAATCTACCTGGAACTGCATACCGAAAGGCGTTAAAGTCTAGGTCCACCATACTGAAGTTCATAGAGGGGAAAATGGAAGAGAGAGTGAAGAGAATCCAAGAGGGAAACGAGAGTTTGGAGGAAGACGATCTTCTGAACTGGGTTTTGAAGCACTCCAATCTCTCCACGGAACAAATTCTTGACTTGATTCTCAGTCTGCTCTTCGCTGGCCATGAAACTTCCTCAGTAGCCATAGCTCTAGCCATCTACTTTTTGCCCGGTTGTCCTCAAGCTATGCAACAGTTAAGGGAAGAGCACGGTGAAATTGTCAGAGCCAAGAAACAAGCAGGGGAAGTCGAACTCACTTGGGACGATTACAAAAGAATGGAATTCACTCACTGCGTTGTGAACGAGACACTAAGGTTGGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTCTGAAAGATGTTAATTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACCATGGCGGCAGCGGTGGTGGTGGAGGTTGTCCGAGCAACAAGAGCACGGCGGCGAACAATAACTTTCTGGCGTTCGGCGGAGGGTCACGGCTGTGCGCGGGATCGGAGTTAGCGAAGCTTGAAATGGCGGTTTTCATCCATCATCTGATCATCAACTACCACTGGGAGTTGGCCGAAACAGATGAAGCTTTTGCCTACCCTTTTGTGGACTTCCCAAAGGGCCTACCCATTAGAGTCCAAGCCCAATCTTTGATCTAA 1491 0.4762 MSDSHLTFYSPSSILALLPLFFIFFILIKRKQTKPRLNLPPGNMGWPFLGETIGYLKPYSATTIGEFMEKHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLNSWNQNCTFSAQDEAKKFTFNLMAKHIMSMDPGEIETEQLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSTILKFIEGKMEERVKRIQEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPQAMQQLREEHGEIVRAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVNYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNHGGSGGGGGCPSNKSTAANNNFLAFGGGSRLCAGSELAKLEMAVFIHHLIINYHWELAETDEAFAYPFVDFPKGLPIRVQAQSLI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0305 496 Pfam Cytochrome P450 40 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 Coils Coil 243 263 - -
Pvu2g0305 496 PANTHER CYTOCHROME P450 26 68 492 - -
Pvu2g0305 496 Gene3D Cytochrome P450 28 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 SUPERFAMILY Cytochrome P450 36 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 PANTHER BNAC01G23810D PROTEIN 68 492 - -
Pvu2g0305 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Pvu2g0305 496 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g0305 496 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0305 Pvu-Chr2 3098498 3103000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0305 29 411 Cytochrome P450 AT3G50660 76.980 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0305 K09587 - gmx:100789515 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0305 2 3098498 3103000 Pvu2g0305 2 3098498 3103000 ECH
Pvu2g0305 2 3098498 3103000 Pvu3g2605 3 48110623 48114757 PCT