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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pvu2g0303
ATGGAGATGAAGGACAAAGTGAATAATGAGGATCTTGCTGTGGAGTCTCCAACTTCGGTTCTCGAAGACGAGGATGTTTGTGCCCCCAAAGACGAGGTTAAGTTGGAAGAAGAGTTAATTGCTGATGTGAAAGACGATGGCTCGTCTATTGTATCGAAGACTATGGCAGAGGAGGAAGAGAAGTTACTTAAAGCTAGGATTAAGGAAGAGGAGGTGCAGTGTGGGGAGGCACCTGACCTCAGCGACACACAGTTTAACAAATTGGATGAGCTTTTGACTCAGACCAAACTGTACTCTGAGTTTTTGCTGGAGAAAATGGATGACATCGCACTTACTGTGGATGAACAAGTGAAAGTGGAAGAGCTAGAGAGTAATCCTTCTGCAAAGAGGGGACGTGGATCGAAGAGAAAAGCTGCTTCCCAGTGCAATACTAGGAGGGCCAAGAGGGCAGTTGCTGCCATGCTAACAAGATCTAAAGAAGGTGAGGGGACTGTAGATATGAAAATGACCGAGGAAGAAAGAGTTGAGAAGGAGCAGAAAGAGCTCATGCCTTTACTGACAGGGGGGAAATTGAAGCCTTATCAACTGAAGGGTGTAAAGTGGTTGATTTCCTTGTGGCAAAATGGATTGAATGGGATTCTTGCGGATCAAATGGGTCTTGGAAAGACAATCCAAACGATTGGATTTCTCTCTCATCTAAAAGCAAAAGGTCTGGATGGGCCATACATGATAATTGCTCCTCTATCAACCCTCTCAAACTGGATGAATGAGATTTCTAGGTTTGCACCATCACTTCCTGCCATTGTCTACCATGGTGGCAAGAAGGAGAGAGATGAGATCCGAAGGAAACATATGCCTACTAAAACAATTGGCCCAAAATTTCCCATAGTCATAACTTCTTACGAGGTTGCATTAAATGACGCTAAGAAATATTTCAGGTCATACAATTGGAAATATCTCGTTGTTGATGAGGGACACAGGCTCAAAAATTCAAAATGCAAATTAGTGAAGGAGTTGAAATACATAAAAGTTGAAAACAAGATTCTTCTAACTGGAACTCCTCTTCAGAATAACCTGGCCGAATTATGGTCTCTATTGAACTTCATTTTGCCTGATATTTTTGCATCCCTTGAAGAATTTGAGTCATGGTTTAATCTGTCAGCGAAGGGCAATAATGAAGCAACCAAGGAAGAACTGGAAGAGAAACGGAGATCCCAAGTAGTGGCAAAACTTCATGCTATTCTTCGACCCTTTCTTCTGCGTAGGATGAAGTCTGATGTTGAGATTATGTTGCCAAAGAAAAAAGAGATTATTATCTATGCAAACATGACGGATCATCAGAAGAATTTGCAGGATCATTTAGTTAATAAGACGTTGGGAAACTATTTAGAAGGAAAGATGTCAAGCGGACGCCCTGTTCCTGGAGGTACGATTCGTAATTTGGTTATTCAGCTTAGGAAAGTGTGTAACCATCCTGATCTTCTAGAATCAGCTTATGATGATACATCTTGCTATCCTCCTTTAAATGAGATAGTTGAACAGTGTGGAAAATTCCATTTGCTTGATCGATTGGTGGAACGTTTATTTGCAAGGAATCACAAAGTTCTTATCTTCAGTCAATGGACTAAAGTGTTGGATATAATGGATTATTATTTTAGTGAAAAAGGCTTTGAAGTTTGCAGGATTGATGGTTCTGTGAAACTGGATGAGAGGAAACGACAGATCGAGGACTTCAACGATGCAAATAGCAATTGCAGAGTTTTTCTTCTTTCTACTAGGGCTGGTGGATTGGGAATCAACCTCACTGCAGCTGATACTTGCATTCTTTATGACAGTGACTGGAATCCTCAGATGGATTTACAAGCCATGGATAGGTGTCATAGAATTGGTCAAACAAAGCCTGTTCATGTCTACCGGCTCTCAACTGCTCAATCTATAGAGGATCGCATGTTGAAAAGAGCTTTCAGCAAATTGAAGCTTGAGCATGTAGTGATTGGGAAAGGACAGTTTCATCAAGAACGTACAAAAACTGTCAATAGGGATGACATAGAGGAAGAGGATTTTTTGGCATTGCTTCGTGACGAAGAAACAGCCGAAGATAAAATGATTCGAACAGATATTAGTGATGAAGACCTGGAGAAGGTCTTGGATCGCAGTGATCTTATTATCGTCAACAACTCAGACGATGGTAACTCGAAACCTCCATGCAGTACCATTCCTCTTAAAGGGCCAGGGTGGGAGGTGGTGATTCCAAATGCGGGTGGAGGCATGCTCTCTACTCTCAACAGCTAG
2292
0.4171
MEMKDKVNNEDLAVESPTSVLEDEDVCAPKDEVKLEEELIADVKDDGSSIVSKTMAEEEEKLLKARIKEEEVQCGEAPDLSDTQFNKLDELLTQTKLYSEFLLEKMDDIALTVDEQVKVEELESNPSAKRGRGSKRKAASQCNTRRAKRAVAAMLTRSKEGEGTVDMKMTEEERVEKEQKELMPLLTGGKLKPYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKAKGLDGPYMIIAPLSTLSNWMNEISRFAPSLPAIVYHGGKKERDEIRRKHMPTKTIGPKFPIVITSYEVALNDAKKYFRSYNWKYLVVDEGHRLKNSKCKLVKELKYIKVENKILLTGTPLQNNLAELWSLLNFILPDIFASLEEFESWFNLSAKGNNEATKEELEEKRRSQVVAKLHAILRPFLLRRMKSDVEIMLPKKKEIIIYANMTDHQKNLQDHLVNKTLGNYLEGKMSSGRPVPGGTIRNLVIQLRKVCNHPDLLESAYDDTSCYPPLNEIVEQCGKFHLLDRLVERLFARNHKVLIFSQWTKVLDIMDYYFSEKGFEVCRIDGSVKLDERKRQIEDFNDANSNCRVFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIEDRMLKRAFSKLKLEHVVIGKGQFHQERTKTVNRDDIEEEDFLALLRDEETAEDKMIRTDISDEDLEKVLDRSDLIIVNNSDDGNSKPPCSTIPLKGPGWEVVIPNAGGGMLSTLNS*
764
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pvu2g0303
763
Coils
Coil
53
73
-
-
Pvu2g0303
763
ProSiteProfiles
Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
203
372
IPR014001
-
Pvu2g0303
763
PANTHER
BNAC07G16550D PROTEIN
7
762
-
-
Pvu2g0303
763
ProSiteProfiles
Superfamilies 1 and 2 helicase C-terminal domain profile.
520
683
IPR001650
-
Pvu2g0303
763
CDD
DEXHc_HELLS_SMARCA6
188
424
IPR044753
GO:0005524
Pvu2g0303
763
PANTHER
SNF2/RAD54 HELICASE FAMILY
7
762
-
-
Pvu2g0303
763
SMART
ultradead3
187
383
IPR014001
-
Pvu2g0303
763
MobiDBLite
consensus disorder prediction
122
142
-
-
Pvu2g0303
763
SUPERFAMILY
P-loop containing nucleoside triphosphate hydrolases
424
716
IPR027417
-
Pvu2g0303
763
MobiDBLite
consensus disorder prediction
1
24
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pvu2g0303
Pvu-Chr2
3063228
3069240
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pvu2g0303
177
651
RAD5 or RAD16-like Gene Family
AT3G16600
23.966
5.96e-32
130
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
SNF2
Pvu2g0303
SNF2_N
1.7e-64
CL0023
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pvu2g0303
K19001
-
gmx:100777687
1319.29
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Pvu2g0303
2
3063228
3069240
Pvu2g0303
2
3063228
3069240
ECH
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