Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0300 ATGTCTTCCTCTACTCCTCATAACAATTCTCCCGATGATGAAACACCTGATAACGCCACCCCTGATGACGCTGACAACTCATCTTCACCACCGTCAAAATCACCACCTCCGTCGTCACCACCTCCGTCATCACCACCTCCGTCATCACCGCCACCATCATCATCACCACCTCCATCTCCCCCAACGCCATCCTCTTCATCCTCGCCACCCCCATCAGAAAAGTCCCCTCCTTCCCCTCCAACGTCAAGCAATTCAAGCCCGCCATCACCCAATAGTTCCTCCCAGTCACCTTCTCCACCCGGATCCTCACACTCTCCTCCCTCCTTTGAATCACCCTCTCCTCCACACAAATCGTTACAATCTCCACCCACTTCAAAAAATAGTGGCAATAGAAGTAACGGTGGCAGTACTCGTGGAAGTGACAATAGCAGTAACCGTGGCAGCAACGATAACAGTAGAGCCATAGTTGGAGCAGTGCTTGGGGTTGGGAGCGTGCTTCTTCTTTTGGTCATCGTCTGCGTTATCTGCTCCAGGAAGAAGAAGAAGAAGAGAATGTACTATTATGGAGAGCAATCACTTGGAAAAGGGAATAATAACTATTACAATAGCGGGCAACACCAAGGTTATTACGGAGGTCCACACGGGGACCATGTGGTGAGGGTACAAAATGGAATGGGTCCTGGTGGTGGTGGTGGAGGAGGAGGTGGGTGGGGGGCACCACCGCCTCCTCCTATGATGAATAGTGCTGATATGAGCTCGAACTACTCGACGGGACCCGCTTTGCCTCCTCCCTCACCAAGCCTTGCTCTAGGCCTGAAAGGTGGCACCTTCACTTATGAGGAACTATCTGCTGCCACCAACGGATTCGATGATTCAAAACTGATTGGACAAGGGGGCTTCGGTTATGTCCACAAGGGTGTGTTGCCAAATGGAAAGGAAGTTGCAGTGAAGAGTCTAAAAGCAGGAAGTGGACAGGGAGAACGAGAGTTCCAAGCTGAGATTGACATCATTAGTCGTGTTCATCATCGCCATCTTGTGTCACTCGTTGGATACTCAATTTCTGGTGGCCAGAGAATGTTGGTCTATGAATTTATTCCCAATAATACATTGGAATATCATCTTCATGGAAAGGGCAGGCCTACAATGGATTGGCCTACTAGAATGCGAATTGCAATAGGATCATCCAAAGGACTTGCTTATCTTCATGAAGATTGTCATCCTCGTATAATCCATCGTGATATTAAAGCTGCGAATGTCCTGATTGATGATAGCTTCGAAGCAAAGGTTGCTGATTTTGGATTGGCTAAGTTGACTTCCGATAATAATACTCATGTATCGACTCGAGTCATGGGAACTTTCGGGTACCTAGCCCCAGAATATGCATCAAGTGGAAAATTGACTGAGAAGTCTGACGTTTTCTCATTTGGGGTCATGCTATTGGAACTCATAACTGGGAGACGACCTGTGGATCACACAAGTGCCATAGACGATAGCTTAGTAGATTGGGCTCGACCACTGCTGAATCGTGGATTGGAAGAGGATGGTAACTTTGGAGAGTTGGTTGATCCATTCTTGGAGGGAAACTACAATCCTCAAGAATTGGCAAGGATGGCAGCTTGTGCTGCTTCTAGCATTCGTCATTCTTCCAAGAAACGTCCAAAAATGAGCCAGATTGTAAGAATATTGGAAGGAGACGTGTCGCTGGATGATTTGAAAGACGGGATGAAGACAGGGCAGAGTGCTGCTTTCACTTCTTCATCTGGGTCAGGACAGTATGATACAATGCAATACAATGCAGACATGGAAAAGTTTAGAAAGGCAGTGTTTTCTAGCCAAGAATTTGACACGAGCAGTGGTGGCTCTAGTAGTGAAGTGATCCAAAAACAAAAACACTAG 1896 0.4731 MSSSTPHNNSPDDETPDNATPDDADNSSSPPSKSPPPSSPPPSSPPPSSPPPSSSPPPSPPTPSSSSSPPPSEKSPPSPPTSSNSSPPSPNSSSQSPSPPGSSHSPPSFESPSPPHKSLQSPPTSKNSGNRSNGGSTRGSDNSSNRGSNDNSRAIVGAVLGVGSVLLLLVIVCVICSRKKKKKRMYYYGEQSLGKGNNNYYNSGQHQGYYGGPHGDHVVRVQNGMGPGGGGGGGGGWGAPPPPPMMNSADMSSNYSTGPALPPPSPSLALGLKGGTFTYEELSAATNGFDDSKLIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYSISGGQRMLVYEFIPNNTLEYHLHGKGRPTMDWPTRMRIAIGSSKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDHTSAIDDSLVDWARPLLNRGLEEDGNFGELVDPFLEGNYNPQELARMAACAASSIRHSSKKRPKMSQIVRILEGDVSLDDLKDGMKTGQSAAFTSSSGSGQYDTMQYNADMEKFRKAVFSSQEFDTSSGGSSSEVIQKQKH* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0300 631 ProSiteProfiles Protein kinase domain profile. 289 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0300 631 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Pvu2g0300 631 Gene3D Transferase(Phosphotransferase) domain 1 365 577 - -
Pvu2g0300 631 PANTHER RECEPTOR-LIKE KINASE 49 625 - -
Pvu2g0300 631 SMART serkin_6 289 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0300 631 MobiDBLite consensus disorder prediction 30 119 - -
Pvu2g0300 631 SUPERFAMILY Protein kinase-like (PK-like) 271 562 IPR011009 -
Pvu2g0300 631 MobiDBLite consensus disorder prediction 120 149 - -
Pvu2g0300 631 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 49 625 - -
Pvu2g0300 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Pvu2g0300 631 MobiDBLite consensus disorder prediction 1 149 - -
Pvu2g0300 631 Pfam Protein tyrosine and serine/threonine kinase 293 493 IPR001245 GO:0004672|GO:0006468
Pvu2g0300 631 Gene3D Phosphorylase Kinase; domain 1 269 364 - -
Pvu2g0300 631 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0300 Pvu-Chr2 3035320 3043539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0300 144 618 Trihelix Transcription Factor Family AT1G70460 50.309 7.34e-154 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pvu2g0300 PK_Tyr_Ser-Thr 7.4e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0300 2 3035320 3043539 Pvu3g2603 3 48083242 48086942 PCT