Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0298 ATGGTCAACAAAATTCCTAGCTCTGCCTCCAAACATCATAAACATCAGGGAAAGTCAGCAATAGATGTTACTAGAAGAACTATGAAGACCAAGATTAAAGTGTTGACAGATCAATTCCATGCTCAGAGAGGGCAATCAGTTAAAGAAAAAGTTCAAAGACATTGGAGGAACCTTGAGCCTCTTTCTCCAACGAGAGTACTATCAGGGAATGAGTATTTGCGGGAAGGGAACGTCAATATGCTGTGTTTGAGAATTAACAATCCTTTATGTAAATTCACTGGGTTCCCTGAAGCTACACTAGAGGAGGATCAAATCAATAATGTGGACATATCATCGGCAGAAAGTATTACGATTCCAAACAAGGAAAAATTACCATCATATACGACTTGGGTATATGTGGCCAGAAATGAGAGAATGGTTGATGATCAATCGGTCATAGGAAAATATCAAATGTACTATGACCAAAATAGAGGTGAAATGATGATATGCAGTGATAATGAGGAAGAGATACCAAATACCAAGGATGTTAAACATGAATTCACTGAGGCTGAAGATCAAATTCTGAGGATGACACTCGAGGAATACGGGTCTACTAAGGAGGTATTGGGTGTCATTAAAGAGATTGTTGAGACTAACGCTTCACAAATTCAGGAGAGGTACGAAAAACTAAAGGAAAAGAATATGGAGAGTCCGGATCAACATTCTAAAGATTGTCATTGTAAAGGATGCGAAAATCATCTTGGAATATGTCTGGAGAAAAGCTTGAGTGGTGGTTTAGAAACTTTTGATAAAATCTTCTGTCGTCGATGTTTGATCTTTGACTGTGCAATCCATGGCACTGATCAACCTTTAATATATCTTAGCGAAAAACATGTCTGCTCTGAACCTGAAGGTGGTAGGAAACCATGCAGTGATCAATGTTACCTTCTGGATAAAAGAATTACACCAATGGAAGAGGACTCGACATTGCCTCCTAATGAGCCTCAGAGTTCTTGTAAGCTGAAGAAAGTCCCAGATGATATAATTATCAAAATTGGCAATCATTACAGTGAACTAAATTTGGATGCTAGTGACAAAGATAACCACACAACATCCCGTGCATCTTTGAAAAGTCTAGATGAACATGCGTCAAAGCAATTATCAGTTTCTGGTAGCTTTGACCATAGTGAGCGGGACAAAGGAGTTACGAATGGACAAAAAGATCTTACAAAGGAGATAGAATTTAACGACATGTCCATTTCAAAGGAAGTGCAAGCTGGTGAGATGATAAGTGACTCAGATTGGAGACCTCTAGAGAGAGATTTATATTTGAAGGGAGTAGAAATGTTTGGAAAAAATAGTTGCCTTATAGCCGCTACCTTACTTCCTGGCTTGAAGACTTGCTTGCAAGTAGCTAGGTATATGTTTGCTGGTGGAGAGTCAATGATCCATGGATCCACACCAAATTCAACAGTGGATAGAAATGAAAAGATCAATCCAGAGTGCACAGACGTAGAAATGTTAGCAAGATCAAGGTCACAACGGAAAAAGGGAAAACCTAGGAAGTTCAACTATAGTCGAAAGTCTGCTGGTCTCCCACCTAGATGGAGAAAAATTGCTTATGGCCAAAACCTGTGTAATAAGCAATATACTCCTTGTGGGTGTCATGGAATGTGTGGAAAGGAATGTTCTTGTCTTCTTAATGGAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGATATGCAAAAATCGATTCAGGGGATGTCATTGTACCAAGAGTCAATGCAGAAGTCGATTGTGTCCATGCTTTGCAGCCAATCGTGAGTGTGACCCGGATGTATGTCGAAATTGTTGGGTTAGTTGCGGCGATGGTTCATTAGGGGAGCCACCTCGACGAGGAGATGGTAAATGCAGAAATATGAATATTCTTTTAGGACAAAAAGAGAGGATTCTTTTGGCAAAGTCAGATGTTATAGGATGGGGAGCATTCGCAAAGAACCCAATTAACAAAAATGTTTGCCTAGGAGAGTACAAAGGTGAACTAATTCCTCCTAAAGAAGCAGAAAAACGTGGGAAACTATATGATCGTATCAACACTTCCTTCCTTTTTAACCTCAATAATAAGTGGGTTATTGATGCTCATCGTCTAGGAGACAAATTAAAATTTGCGAACCATTCAGCAAAACCCAACTGCTATGCAAAGGTGATGCTTGTTGGAGGAGAACATCGAGTGGGAATATTTGCCAAGGAAAACATTCAAGCTGGTGATGAGATTTTTTATGACTATTGGTATGATCTAGATTGCGCACCATCATGGGCTCTTCCACCAGAAGACAATGCTTCCAAAAAAGATGAACCAGTTACTTCACAAACCAAGACCAAGAAACGTTAG 2373 0.3953 MVNKIPSSASKHHKHQGKSAIDVTRRTMKTKIKVLTDQFHAQRGQSVKEKVQRHWRNLEPLSPTRVLSGNEYLREGNVNMLCLRINNPLCKFTGFPEATLEEDQINNVDISSAESITIPNKEKLPSYTTWVYVARNERMVDDQSVIGKYQMYYDQNRGEMMICSDNEEEIPNTKDVKHEFTEAEDQILRMTLEEYGSTKEVLGVIKEIVETNASQIQERYEKLKEKNMESPDQHSKDCHCKGCENHLGICLEKSLSGGLETFDKIFCRRCLIFDCAIHGTDQPLIYLSEKHVCSEPEGGRKPCSDQCYLLDKRITPMEEDSTLPPNEPQSSCKLKKVPDDIIIKIGNHYSELNLDASDKDNHTTSRASLKSLDEHASKQLSVSGSFDHSERDKGVTNGQKDLTKEIEFNDMSISKEVQAGEMISDSDWRPLERDLYLKGVEMFGKNSCLIAATLLPGLKTCLQVARYMFAGGESMIHGSTPNSTVDRNEKINPECTDVEMLARSRSQRKKGKPRKFNYSRKSAGLPPRWRKIAYGQNLCNKQYTPCGCHGMCGKECSCLLNGTCCEKYCGCSKICKNRFRGCHCTKSQCRSRLCPCFAANRECDPDVCRNCWVSCGDGSLGEPPRRGDGKCRNMNILLGQKERILLAKSDVIGWGAFAKNPINKNVCLGEYKGELIPPKEAEKRGKLYDRINTSFLFNLNNKWVIDAHRLGDKLKFANHSAKPNCYAKVMLVGGEHRVGIFAKENIQAGDEIFYDYWYDLDCAPSWALPPEDNASKKDEPVTSQTKTKKR* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0298 790 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 25 789 IPR045318 GO:0006338|GO:0018024
Pvu2g0298 790 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 75 790 IPR025778 GO:0031519
Pvu2g0298 790 Coils Coil 206 226 - -
Pvu2g0298 790 CDD SET_EZH 642 758 - -
Pvu2g0298 790 SMART CXC_2 577 614 IPR033467 -
Pvu2g0298 790 MobiDBLite consensus disorder prediction 369 399 - -
Pvu2g0298 790 Pfam SET domain 653 756 IPR001214 GO:0005515
Pvu2g0298 790 Pfam CXC domain 581 612 IPR041355 -
Pvu2g0298 790 ProSiteProfiles CXC domain profile. 529 628 IPR026489 -
Pvu2g0298 790 SMART set_7 642 765 IPR001214 GO:0005515
Pvu2g0298 790 MobiDBLite consensus disorder prediction 768 790 - -
Pvu2g0298 790 MobiDBLite consensus disorder prediction 385 399 - -
Pvu2g0298 790 MobiDBLite consensus disorder prediction 1 21 - -
Pvu2g0298 790 MobiDBLite consensus disorder prediction 772 790 - -
Pvu2g0298 790 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 25 789 - -
Pvu2g0298 790 Gene3D SET domain 543 758 IPR046341 -
Pvu2g0298 790 SUPERFAMILY SET domain 539 760 IPR046341 -
Pvu2g0298 790 ProSiteProfiles SET domain profile. 642 757 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0298 Pvu-Chr2 3018476 3031057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0298 631 756 C2H2 Transcription Factor Family AT2G23740 26.573 7.40e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu2g0298 SET 6.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0298 - K11430 vra:106776653 1397.88