Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0283 ATGAGAGTTCCCGTTCCCTCATCTCCACAGACTAACCCCAAACCCACTAATAACGTAGTCCGTACCATTGCCCTTCCCAACCTCAACACCACGGGCCTCTGCTACGAGCCCACCTCCGTCCTCGACCTGTGCCGAAGCCCCAGCCCGGGCTCCGAAAAGCCCACCGACCACACAGTTGTTGTGACGGACTCCCAGGATTGTCTGGACCTGGACGACCATGCGTTGCACAACTTGGATTGGGACTCCATCATGAAGGACTTGGGCTTACACGACGACTCAGGTGCTCACCTTCTGAAGACGATTCCACATCCCGACAACAACAACAACCCATGCGATGACTTCACAATCGCACCTTTCGAACACGCGCTTGAATTCTCCACTCTCTCCGACATCTACTCCAACCAAAACCTCGCCTTCGATTTTAACCACCTGGTTCACGACTTCAGCAACCACCATCACAACAACGGCTTCGATTTCATCGAAGAGCTCATCCGCGCCGCGGATTGCTTCGACACCAAGCAATTACACGTGGCACAAGTGATATTGGAGCGGCTCAATCAGCGGCTACGATCACCCGTTGGAAAACCTCTCCAACGCGCGGCGTTTTACTTCAAAGAAGCTCTCCAGTCTCTTCTCTCCGGTTCGAACCGGACGCCCAGGATTTCCTCGCTGGTGGAAATCGTGCATGGCATCAGAACCTTCAAGGCCTTCTCCGGAATCTCGCCGATCCCAATGTTCTCGATCTTCACCACCAACCAGGTGGTTCTCGATCACGCTGCGTGCTCCTTCATGCATGTCATCGATTTCGACATCGGCCTCGGCATCCAATACGCTTCTCTCATGAAGGAGATAGCGGAGAAGTCCACGGACTCGCCGCTTCTCCGAATCACCGCCGTCGTTCCCGAAGAGTACGCCGTGGAGAGCACGCTGGTCCGGGAAAACCTGGCGCAGTTTGCTCTAGAACTCAGGATCCGCATCGAGGTCGACTTCGTGCCGCTCCGAACCTTCGAGACGCTCTCCTTCAAGGCGGTGAAGCTCGTCGACGGCGAGAGCACCACCGTGCTGCTTTCGCCAGTGATTTTCCGCCACCTCGGAAATGCTGCCGCGTTCTTGGCCGACTTGCGGAGGGTCTCTCCCAGTGTGGTGGTTTTTGTGGATGGAGAGGGGTGGGCGGATATGGCCACAGCAGCGGCCTCGTCGTTCCGACGCGGCGTGGTGAGCAGTTTGGAGTACTACTCAATGATGCTGGAGTCGCTGGATGCGTCGACGGCTGGGGGAGGAGGGGAGTGGGTGAGGAGAATCGAGATGATGCAGCTGCGACCGAAGATTTTGGCGGCGGTGGAGAGTTCGTGGCGGCGGATGCCGCCATGGAGGGAGGCCTTTTACGGCGCCGGAATGAGGGCAGTTCAGTTGAGTCAGTTCGCAGATTTCCAAGCAGAGTGCTTGTTGGCGAAGTCGCAAATCAGAGGGTTCCACGTGGAGAAACGTCAGAACGAACTGGTGCTATTCTGGCATGACCGGGCCATGGTTTCCTCGTCAGCATGGCGGTTTTAG 1554 0.5676 MRVPVPSSPQTNPKPTNNVVRTIALPNLNTTGLCYEPTSVLDLCRSPSPGSEKPTDHTVVVTDSQDCLDLDDHALHNLDWDSIMKDLGLHDDSGAHLLKTIPHPDNNNNPCDDFTIAPFEHALEFSTLSDIYSNQNLAFDFNHLVHDFSNHHHNNGFDFIEELIRAADCFDTKQLHVAQVILERLNQRLRSPVGKPLQRAAFYFKEALQSLLSGSNRTPRISSLVEIVHGIRTFKAFSGISPIPMFSIFTTNQVVLDHAACSFMHVIDFDIGLGIQYASLMKEIAEKSTDSPLLRITAVVPEEYAVESTLVRENLAQFALELRIRIEVDFVPLRTFETLSFKAVKLVDGESTTVLLSPVIFRHLGNAAAFLADLRRVSPSVVVFVDGEGWADMATAAASSFRRGVVSSLEYYSMMLESLDASTAGGGGEWVRRIEMMQLRPKILAAVESSWRRMPPWREAFYGAGMRAVQLSQFADFQAECLLAKSQIRGFHVEKRQNELVLFWHDRAMVSSSAWRF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0283 517 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 516 IPR005202 -
Pvu2g0283 517 Pfam GRAS domain family 160 516 IPR005202 -
Pvu2g0283 517 ProSiteProfiles GRAS family profile. 150 516 IPR005202 -
Pvu2g0283 517 PANTHER SCARECROW-LIKE PROTEIN 15 6 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0283 Pvu-Chr2 2913459 2915012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0283 68 517 GRAS Transcription Factor Family AT4G36710 55.063 1.00e-167 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu2g0283 GRAS 1.1e-79 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0283 - - gmx:100807470 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0283 2 2913459 2915012 Pvu2g0283 2 2913459 2915012 ECH
Pvu2g0283 2 2913459 2915012 Pvu3g2596 3 47996213 47997847 PCT