Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0272 ATGACCGGAGGTGGATCGACGGGGAGGATGCCGACGTGGAAGGAGAGGGAGAACAACAAGCGGAGAGAGAGAAGACGGAGAGCGATTGCTGCTAAGATCTACACCGGCCTTCGAGCTCAGGGGAACTACAAGCTTCCCAAGCACTGCGACAACAACGAGGTCCTGAAGGCTCTGTGCGCAGAGGCTGGTTGGATCGTGGAAGAAGATGGCACCACCTATAGAAAGGGATGCAAGAGACCCACGGGAAGTGAGATTGGAGGCACTCCACCCAACATAAGCGC 281 0.5658 MTGGGSTGRMPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKRPTGSEIGGTPPNIS 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0272 93 MobiDBLite consensus disorder prediction 1 25 - -
Pvu2g0272 93 MobiDBLite consensus disorder prediction 73 93 - -
Pvu2g0272 93 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 6 78 - -
Pvu2g0272 93 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 90 IPR008540 -
Pvu2g0272 93 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 6 78 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0272 Pvu-Chr2 2843858 2844244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0272 9 93 BZR Transcription Factor Family AT4G36780 83.529 5.22e-36 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pvu2g0272 BES1_N 4.4e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0272 K14503 - pvu:PHAVU_002G0267001 173.711