Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0262 ATGCATCTCTTTCCCTTCACTCTCATAATCTTTTTCACCGTTTTGATCCACAACTTCTCTCTGATTCTGGGGCAGCAACCTTATATTGGTTTAGGCACAGTAGCATGCCCTTCAAGTGGTAACAAAAACTCTATTCGTGGTTACACTTGTAATGGTGCAAACAGCTGCCAAGCATTCCTTACTTTCAGATCTCAACCCATTTACAACTCTGTCTCCACAATATCTACTTTATTAGGTTCTGATCCGTCCCAACTTGCTCATATAAATTCCGTTTCCCTGAATGACACCTTCCAAACAAACAAGTTGGTGCTTGTTCCGGTCAACTGTTCCTGTGCAGGTGAGTATTATCAAACAAACACATCCTATGTATTCCAGAATTCAGAAACTTACTTCTTGATTGCTAATAACACTTTCGAGGGCCTCACAACATGTCAAGCTTTGCAGAGTCAAAACCACAACCCAGCAAACATATACCCCGGTAGAAAACTTCTAGTGCCTCTCAGATGTGCTTGTCCCACCAAAAACCAAACCGAGATAGCCATTAGGTACCTCTTAAGCTACTTGGTGAAGCCGGATGATTTTGTTTCAGTCATCGCTGAGAAATTTGGTGTTGGCACTATGACCACTCTTGAAGCTAATAGCCTCACTTTGTCACAATCCACTATCTATCCCTTTACTACACTTCTAATTCCCCTTCACGATAAGCCCTCAAGTTCTCAAACCGTTTCTCCAGCTCAACTTACGCCACCCCCCTCATCACCCCCCTCTTCTCATCACAAGAAAACATGGGTGTATGCTGTTGTTGGAGCTGTTGCCTTGACATCAGCTCTTTGTGCTGTCATTTTCTTCACACGCTATCGCAAAAATAGAAACAAAGACGAGTCAGCGGTAGTGGCCAAGAATTTTGAGGCAACTAAGAAAAAACCACAAAGGAGGGTAAATGAAAAATTTTCAGAGATCATATCTGGCATAGGTCAATCGTTCAAGGTGTATGATTTTGAGGAACTAAAGCGAGCAACAGATAACTTTAGTCCTAGCTACTGGATCAAAGGGTCTGTTTATCGCGGTGTGATTAATGGTGATTTGGCAGCAATTAAAAAGATCGAAGGTGATGTGACAAAGGAGATGGAGATACTGAACAAAATCAACCATTCCAATGTTATACGCCTTTCCGGGGTTAGCTTCCACGAGGGGCGTTGGTACCTTGTTTTTGAGTATGCTGCTAATGGAGCTTTGAGTGAATGGATCTTCTTCAACAACGTGGATGGGAAGTTTCTGAGTTGGACGCAGAGAATACAGATTGCATTGGATGTGGCCACAGGACTAGATTATCTTCACAGTTTCACTTCTCCTCCTTATATCCACAAGGATATCAAGAGTTGTAACATTCTTCTGGATGGTGACTTCAGGGGAAAGGTTGCAAATTTAAGCCTTGTTAGGCGTGTGGAAGGAGGGGAAGATCAATTTCCTGCCACTAGGCACATTGTTGGGACAAGAGGCTACATGGCTCCCGAGTATTTGGAACATGGTCTTGTATCTACGAAGCTTGATGTGTATGCTTTTGGGGTAGTGATGCTGGAAATGATCACAGGAAAAGAGGTTGCTGCTATTCTAACAGAAGACGAGACAAACTTGTCACATGTTTTACGTGTCATGCTTGGTGAAGAAAGTGGCCAGGAGAGGTTGAAGGCGTTTGTGGATCCCTCTTTGCAAGAAAATTGTCCATTTGAACTTGCTATGTTTGTGATTGAAATGATTGATAACTGCATATCGAGTGATCCAGCAAGTCGTCCTAGTGTGCATGAGATTGTGCAATCTCTGTCAAGAACCCTGAATTCTTCACTGAGTTAG 1851 0.4284 MHLFPFTLIIFFTVLIHNFSLILGQQPYIGLGTVACPSSGNKNSIRGYTCNGANSCQAFLTFRSQPIYNSVSTISTLLGSDPSQLAHINSVSLNDTFQTNKLVLVPVNCSCAGEYYQTNTSYVFQNSETYFLIANNTFEGLTTCQALQSQNHNPANIYPGRKLLVPLRCACPTKNQTEIAIRYLLSYLVKPDDFVSVIAEKFGVGTMTTLEANSLTLSQSTIYPFTTLLIPLHDKPSSSQTVSPAQLTPPPSSPPSSHHKKTWVYAVVGAVALTSALCAVIFFTRYRKNRNKDESAVVAKNFEATKKKPQRRVNEKFSEIISGIGQSFKVYDFEELKRATDNFSPSYWIKGSVYRGVINGDLAAIKKIEGDVTKEMEILNKINHSNVIRLSGVSFHEGRWYLVFEYAANGALSEWIFFNNVDGKFLSWTQRIQIALDVATGLDYLHSFTSPPYIHKDIKSCNILLDGDFRGKVANLSLVRRVEGGEDQFPATRHIVGTRGYMAPEYLEHGLVSTKLDVYAFGVVMLEMITGKEVAAILTEDETNLSHVLRVMLGEESGQERLKAFVDPSLQENCPFELAMFVIEMIDNCISSDPASRPSVHEIVQSLSRTLNSSLS* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0262 616 ProSiteProfiles Protein kinase domain profile. 316 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0262 616 SMART serkin_6 348 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0262 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Pvu2g0262 616 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 6 615 - -
Pvu2g0262 616 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 615 - -
Pvu2g0262 616 Gene3D Phosphorylase Kinase; domain 1 289 406 - -
Pvu2g0262 616 Gene3D LysM domain 185 243 IPR036779 -
Pvu2g0262 616 Gene3D Transferase(Phosphotransferase) domain 1 407 614 - -
Pvu2g0262 616 ProSiteProfiles LysM domain profile. 185 230 IPR018392 -
Pvu2g0262 616 Pfam LysM domain 122 166 IPR018392 -
Pvu2g0262 616 Pfam LysM domain 187 231 IPR018392 -
Pvu2g0262 616 CDD LysM 186 230 IPR018392 -
Pvu2g0262 616 SMART LysM_2 121 166 IPR018392 -
Pvu2g0262 616 SMART LysM_2 186 231 IPR018392 -
Pvu2g0262 616 SUPERFAMILY Protein kinase-like (PK-like) 326 607 IPR011009 -
Pvu2g0262 616 MobiDBLite consensus disorder prediction 236 258 - -
Pvu2g0262 616 Pfam Protein kinase domain 353 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0262 Pvu-Chr2 2760341 2762191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0262 4 611 Receptor kinase-like Gene Family AT2G23770 42.332 3.54e-163 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pvu2g0262 Pkinase 1.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0262 - - gmx:100779907 1025.77