Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0260 ATGGCTGTCTTCTTTGTTTCTCTTACTCTTGGTGCTCAGATTCTTTATGTGGTACTCATGTTTTTCACTTGTATTGAAGCTCAATCACAACAGACCAATGGAACAAACTTTTCATGCCCTTCCAATTCACCTCCTTCATGTGAAACCTATGTGACATACATATCCCAGTCGCCAAATTTTTTGAGTCTGACCAGCGTATCTAATATATTTGACACGAGTCCTTTGTCAATTGCCAGAGCCAGCAACTTACAGCATGAGGAAGACAAGTTGATTCCAGGCCAAGTCTTACTGATACCAGTAACCTGTGGTTGCACTGGAAACCGCTCTTTCGCCAACATCTCCTATGAGATCAACCAAGGTGATAGCTTCTACTTTGTTGCGACCACTTTATACCAGAATCTCACAAATTGGCATGCAGTGATGGATTTAAACCCAGGTCTAAGTCCATTTACTTTGCCAATAGGCATCCAAGTTGTAATTCCTTTATTCTGCAAGTGTCCTTCAAAGAACCAGCTGGATAGAGGGATAAAGTACCTGATCACTCACGTCTGGCAGCCCAATGACAATGTTTCCTTTGTAAGTAACAAGTTAGGTGCATCACCACAGGACATATTGAGTGAAAACAACTATGGTCAAAACTTCACTGCCGCAAGCAACCTTCCAGTTTTGATCCCAGTTACACTCTTGCCAGATCTTATTCAATCTCCTTCAGATGGAAGAAAACACAGAATTGGTCTTCCAGTTATAATTGGTATCAGCCTGGGATGCACACTACTGGTTGTGGTTTCAGCAATATTACTGGTGTGTGTATGTTGTCTGAAAATGAAGAGTTTGAATAGGAGTGCTTCATCAGCTGAAACTGCAGATAAACTACTTTCTGGAGTTTCAGGCTATGTAAGTAAGCCTACAATGTATGAAACTGGTGCAATATTGGAAGCTACTATGAACCTCAGTGAGCAGTGCAAGATTGGGGAATCAGTGTACAAGGCTAACATAGAGGGTAAGGTTTTAGCAGTAAAAAGATTCAAGGAAGATGTCACGGAGGAGCTGAAAATTCTGCAGAAGGTGAATCATGGAAATCTGGTGAAACTAATGGGTGTCTCATCAGATAATGATGGAAATTGTTTTGTGGTTTATGAATATGCTGAAAATGGGTCTCTTCAAGAGTGGCTTTTCGCCAAGTCTTGTTCAGAGACATTAAACTCGAGGACCTCCCTTACATGGTGCCAGAGGATAAGCATAGCAGTGGATGTTTCAATGGGTCTGCAGTACATGCATGAACATGCTTATCCAAGAATAGTCCACAGGGACATCACAAGCAGTAATATCCTTCTTGACTCCAACTTTAAGGCCAAGATAGCAAATTTCTCCATGGCCAGAACTTTTACCAACCCCATGATGTCAAAAATAGATGTATTTGCTTTTGGGGTGGTTCTGATAGAATTGCTTACTGGCAGGAAAGCCATGACAACCAAAGAAAATGGTGAGGTGGTTATGCTGTGGACGGACATTTGGAAGATCTTTGATCAAGAAGAGAATAGAGAGGAGAGGCTCAGAAAATGGATGGATCCTAAGTTAGATAATTATTATCCTATTGATTATGCTCTCAGCTTGGCCTCCTTGGCAATGAATTGCACTGCAGACAAGTCTTTGTCCAGACCAACCATAGCAGAAATTGTCCTTAGTCTCTCCCTTCTCACTCAACCATCTCCCGCGACACTGGAGAGATCCTTGACTTCTTCTGGATTAGATGTAGAAGCTACTCAAATTGTCACTTCCATCTCAGCTCGTTGA 1794 0.4181 MAVFFVSLTLGAQILYVVLMFFTCIEAQSQQTNGTNFSCPSNSPPSCETYVTYISQSPNFLSLTSVSNIFDTSPLSIARASNLQHEEDKLIPGQVLLIPVTCGCTGNRSFANISYEINQGDSFYFVATTLYQNLTNWHAVMDLNPGLSPFTLPIGIQVVIPLFCKCPSKNQLDRGIKYLITHVWQPNDNVSFVSNKLGASPQDILSENNYGQNFTAASNLPVLIPVTLLPDLIQSPSDGRKHRIGLPVIIGISLGCTLLVVVSAILLVCVCCLKMKSLNRSASSAETADKLLSGVSGYVSKPTMYETGAILEATMNLSEQCKIGESVYKANIEGKVLAVKRFKEDVTEELKILQKVNHGNLVKLMGVSSDNDGNCFVVYEYAENGSLQEWLFAKSCSETLNSRTSLTWCQRISIAVDVSMGLQYMHEHAYPRIVHRDITSSNILLDSNFKAKIANFSMARTFTNPMMSKIDVFAFGVVLIELLTGRKAMTTKENGEVVMLWTDIWKIFDQEENREERLRKWMDPKLDNYYPIDYALSLASLAMNCTADKSLSRPTIAEIVLSLSLLTQPSPATLERSLTSSGLDVEATQIVTSISAR* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0260 597 Pfam Protein tyrosine and serine/threonine kinase 341 463 IPR001245 GO:0004672|GO:0006468
Pvu2g0260 597 SUPERFAMILY Protein kinase-like (PK-like) 314 563 IPR011009 -
Pvu2g0260 597 Gene3D Phosphorylase Kinase; domain 1 293 381 - -
Pvu2g0260 597 ProSiteProfiles Protein kinase domain profile. 285 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0260 597 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 18 597 - -
Pvu2g0260 597 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 18 597 - -
Pvu2g0260 597 Gene3D Transferase(Phosphotransferase) domain 1 382 465 - -
Pvu2g0260 597 Gene3D Transferase(Phosphotransferase) domain 1 466 577 - -
Pvu2g0260 597 Pfam LysM domain 62 99 IPR018392 -
Pvu2g0260 597 ProSitePatterns Tyrosine protein kinases specific active-site signature. 433 445 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0260 Pvu-Chr2 2732689 2734880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0260 81 566 Receptor kinase-like Gene Family AT3G21630 30.387 2.55e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pvu2g0260 PK_Tyr_Ser-Thr 1.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0260 - - vra:106777834 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0260 2 2732689 2734880 Pvu2g0260 2 2732689 2734880 ECH