Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0251 ATGGAAGTGCTTCCTTGTTCTGGTGTTCAATATGCTGGGGAATCTGATTGCAATCAGCAGAGTTCAGGAACTGCTTTTGTATATCAGGAAGAACCTAATTGTGCTGAAAATAGTGAGCAAGTCAAACTGGCAGCTGCTGCTCAACTGAATGAATCATCACATAAAATGCAAGGGCCTCAGATAGAACGACAATGTGGTTTGTCAACTAATTCAGATTGTCAATGCATTGGAGCTTCATGTTGTGACTGTCAAGTGGATGATCAAAATGACTATTGTGGTTTACATGATTTTGAAGAAGACATTATAAATGAACCTTGCTTGACATCAGACAACTCTATCTCTGTTGTTGATACAATTGAAAGTGAATCACCAAACAACAGTCGGGAAGGAGACTTGTCATGTTCTGAACCCAAGTGGCTTGAGGGGGATGGATCAGTGGCATTGTGGGTCAAGTGGAGGGGGAAGTGGCAGGCTGGTATCCGGTGTGCAAGGGCTGACTGGCCGTTATCAACGTTGAAAGCAAAACCAACACATGAAAGAAAGAAATATTTTGTTATATTCTTTCCACACACAAGGATTTATTCTTGGGCTGACATGCTACTTGTTAGATCAATTAATGAGTTTCCCCATCCCATTGCATATAAGACTCATCAGGTGGGGCTGAAAATGGTAAAAGACTTGACTGTTGCACGGCGGTTTATAATGCGTAAGCTAGTTGTTGGCATGCTGAACATGGTCGATCAGTTTCCTTTTAATGCTTTGACAGAAACTGCTCGTGATATGAAGGTCTGGAAGGAGTTTGCCATGGAGGCTTCTCGTTGTAATGGTTATTCTGATTTTGGAAGAATGCTTCTAAAGTTGCATAATAGCATACTACAGCACCATATAAATGTTGACTGGTTACGACATTCTTATCCCTCTTGGACTGAAAGATGTCAGAGTGCAAATAGTGCTGATTCAGTGGAGCTACTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAATGGGATCAATACTCTCTCTGATGCACCAGTGCAATCAACATTAAGTTCTGAATGGAAAACCTGGAAGCATGATGTAGTGAAATGGTTTTTGGCACCACCTTCCTTATCGATCAGCAAAGACATACAGCAACAGAGTTCTGATGATTTGTACCGAGCAAACCTTCAGGTTTGTAGAAAAAGGGCCAAACTTGAAGTTCGTCGAGCAGATACACATGCTTCACAAGTGGAAATCAAGGCCCAAACTATTGCTCTTCAGGCTGACCCTGGCTTCTTTAAGAATCAGGGCACATTGAGCACATTAGCAGCTGAGTCTTGCAAACAGGAAGGTGTCAGGGAGGTGTCTATGGCAAGTGATTTACCTGGTCATTTGGTCGATAAATGGAATGAAATTGTAGTTGAGAGTACTGATCCCCATTTTTTGCATACCAAAGAAATGGAATCAACACCTACAAAGGAAATGACCGTTGTAAAATCTGTAGAATCTGGTAGTAAGAATCGACAATGTATAGCTTATATTGAAGCAAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTGTACTGTTGTGTACATTTATCCTCCCGGTTTTTGGGCAGCTCAACAAAATCTGAAAAGCCTGTTACACTTGATACTCCTATGTGTGAAGGCACTACTGTTCTGGGTACTAGATGTAAGCATCGTGCCCTACCTGGCTCTCTATTCTGTAAGAAACACCGGCCACATGCTGAGACAGAGCAGATCTCAAATATACCGCAGAATACACTAAAGAGGAAACATGAAGAAAATTATACTGGTTCTGAGGGCATTCTTTCCAGAGACTTGGTATTAGTAAATGTTGAAAGTCCACTGCAAATGGATACAGTGTCATCCATTGGTGGTGATTCCGTACATGGAGAAAACAACTTTAATGAGAAGCCCATGGATTCTGAGCATGATCATAATGTAATGGAGTCCCTGCACTGTATGGGTTCCCCTCCCTATGATAAGATGAATCCTTGTAGGGAAGGTCCTAAACGGTATTGCTTGTACTGCGAAAGTCACCTCCCTAGTTGGCTTAAGCGTGCAAGAAATGGTAAGAGTAGAATAGTATCAAAAGAAGTGTTCACGGAACTTTTGAGGGACTGCAACTCATGGGAGCAAAAGGTACATCTGCATAAAGCATGTGAACTTTTTTACAGGCTTCTTAAAAGCATTTTGTCATTAAGAAACCCTGTTCCTAAGGATGTCCAATTTCAGTGGGCTTTGACTGAAGCCTCTAAAGATTCTAGTGTAGGAGAGTTTTTTAAAAAGTTAGTTCATAATGAAAAGGCCAGAATGAAGTCAATATGGGGATTCAATGATGACATGGATATATTCTCTGTGATGGAAGAACCACCACTCTTGCCATCCACAAACAATGATGACTATGATAAGGAAAATGCCATTAAGTGTAAGCTATGCTCTGCAGAATTTCCTGATGACCAAGAACTTGGTAACCATTGGATGGACAGTCATAAAAAGGAGGCACAGTGGCTGTTTAGAGGCTATGCATGTGCTATTTGTCTGGATTCATTTACTAACAAGAAACTGTTGGAAACACATGTTCAGGAGAGACACCATGTGCAATTTGTTGAACAATGCATGCTTCTCCAGTGCATTCCTTGTGGGAGTCATTTTGGAAATGCAGAACAATTATGGCAGCATGTTTTATCAGTTCACCCTGTTGATTTTAAACCATCAAAAGCTCCTGAGCCGCAAACTTTATCTACTGGTGAAGATTCTCCAGTAAAACATGATCCGGGTAATTCAGCCCCTTTGGAGAATAATTCTGAGAATACAGGTGGTTTTCGGAAATTTGTTTGCAGGTTTTGTGGATTGAAATTTGATTTACTACCTGACCTAGGACGACATCACCAAGCTGCTCATATGGGGCCTAATCTGGCAAGCAGTCGCCCTGCAAAGAGAGGAGTTCAATATTATGCGTACAGATTAAAATCTGGCAGACTTAGCCGCCCCAGATTTAAAAAAAGTTTAGCAGCAGCATCATACAGGCTTAGAAATAAGGCTAATGCTAATTTAAAGCGAAGCATTCAGGAAACAATTTCACATGGCACAGGAGGAATAACCATACAACCTCATGTTACTGAAGCAACAAACATTGGTAGATTGGAAGAACATCAATGCTCAGCTGTTTCAAAGATTTTGTTTTCCGAGATTCAGAAGACGAAACCTCGGCCAAACAATCTTGATATTTTATCAATTGCTCGCTCTGCTTGCTGCAAAGTTAGTCTGGTGGCATCACTGGAGGAGAAATATGGAATTCTTCCTGAAAAGCTCTATTTGAAGGCAGCAAAACTTTGCAGTGAGCATAATATTTTGGTAAGTTGGCCTCAGGAGGGTTTTATTTGTCCCAGAGGTTGTAATGTATTAAAGGCTCAAGCTTCTCTATCTCCTTTAGATTCTCTTCCTAATAGTTCTGTAATCCCCAAAGCTCTGAATTTATCTGATCCTACAAGTGATGAGTGGGAGGTGGATGAATTTCACTGCATCATCAATTCACGAACTTTAAAGTTAGGTTCACTTCAAAAGGCTGTGGTCTTGTGTGATGACATTAGCTTTGGGAAGGAATCAGTTCCAGTGATTTGTGTAGTAGATCAAGAACTTGCGCATTCTCTTCATATCAATGGCTGTAACGGACAAAATATAAACCCTTCTAGGCCTTGGGAGAGCTTTACCTATGTTACAAAGCCAATGCTTGATCAATCCCTCATTCTTGATTCAGAGAGTCTGCAACTGGGATGTGCCTGTTCATACAGTACCTGCTGTCCTGAAACTTGTGATCATGTGTACCTTTTTGGCAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAATAATCCTGGAGGAAGGTTATCTTGTCTATGAGTGTAATCACATGTGCAGATGCAATAAATCCTGTCCGAATAGAGTATTGCAGAATGGAGTACGAGTCAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCAGTAAGGGCTGGTGAAGCTATTCTACGTGGCACATTTGTGTGTGAATACATTGGAGAAGTTTTAGATGTGAAAGAGGCACATGATAGGCGTAGAAGATATGGCACAGAGCATTGCAGTTATTTCTACAACATTGACGCTCGTGTTAATGATATGAGCAGATTGGTTGAAGGACAGGCTCCGTATGTAGTAGATGCTACTAAATTTGGAAATGTTTCAAGATTTGTCAATCATAGTTGCACCCCAAATCTTGTCAATCATCAAGTTCTTGTAGAGAGCATGGATTCTGAACGTGCACATATCGGTTTTTATGCAAATCGAGATATTGCTTTGGGTGAAGAGCTAACATATGACTATCAGTACGAGCTTGTGCTTACAGAAGGATCTCCTTGTCTTTGCGAATCCTTGAAGTGTAGGGGGCGCCTTTATTAG 4491 0.4104 MEVLPCSGVQYAGESDCNQQSSGTAFVYQEEPNCAENSEQVKLAAAAQLNESSHKMQGPQIERQCGLSTNSDCQCIGASCCDCQVDDQNDYCGLHDFEEDIINEPCLTSDNSISVVDTIESESPNNSREGDLSCSEPKWLEGDGSVALWVKWRGKWQAGIRCARADWPLSTLKAKPTHERKKYFVIFFPHTRIYSWADMLLVRSINEFPHPIAYKTHQVGLKMVKDLTVARRFIMRKLVVGMLNMVDQFPFNALTETARDMKVWKEFAMEASRCNGYSDFGRMLLKLHNSILQHHINVDWLRHSYPSWTERCQSANSADSVELLKEELFDSILWNGINTLSDAPVQSTLSSEWKTWKHDVVKWFLAPPSLSISKDIQQQSSDDLYRANLQVCRKRAKLEVRRADTHASQVEIKAQTIALQADPGFFKNQGTLSTLAAESCKQEGVREVSMASDLPGHLVDKWNEIVVESTDPHFLHTKEMESTPTKEMTVVKSVESGSKNRQCIAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSTKSEKPVTLDTPMCEGTTVLGTRCKHRALPGSLFCKKHRPHAETEQISNIPQNTLKRKHEENYTGSEGILSRDLVLVNVESPLQMDTVSSIGGDSVHGENNFNEKPMDSEHDHNVMESLHCMGSPPYDKMNPCREGPKRYCLYCESHLPSWLKRARNGKSRIVSKEVFTELLRDCNSWEQKVHLHKACELFYRLLKSILSLRNPVPKDVQFQWALTEASKDSSVGEFFKKLVHNEKARMKSIWGFNDDMDIFSVMEEPPLLPSTNNDDYDKENAIKCKLCSAEFPDDQELGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNAEQLWQHVLSVHPVDFKPSKAPEPQTLSTGEDSPVKHDPGNSAPLENNSENTGGFRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNLASSRPAKRGVQYYAYRLKSGRLSRPRFKKSLAAASYRLRNKANANLKRSIQETISHGTGGITIQPHVTEATNIGRLEEHQCSAVSKILFSEIQKTKPRPNNLDILSIARSACCKVSLVASLEEKYGILPEKLYLKAAKLCSEHNILVSWPQEGFICPRGCNVLKAQASLSPLDSLPNSSVIPKALNLSDPTSDEWEVDEFHCIINSRTLKLGSLQKAVVLCDDISFGKESVPVICVVDQELAHSLHINGCNGQNINPSRPWESFTYVTKPMLDQSLILDSESLQLGCACSYSTCCPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRIILEEGYLVYECNHMCRCNKSCPNRVLQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVKEAHDRRRRYGTEHCSYFYNIDARVNDMSRLVEGQAPYVVDATKFGNVSRFVNHSCTPNLVNHQVLVESMDSERAHIGFYANRDIALGEELTYDYQYELVLTEGSPCLCESLKCRGRLY* 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0251 1496 ProSiteProfiles Post-SET domain profile. 1480 1496 IPR003616 -
Pvu2g0251 1496 Pfam SET domain 1352 1472 IPR001214 GO:0005515
Pvu2g0251 1496 ProSiteProfiles Pre-SET domain profile. 1262 1338 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu2g0251 1496 SMART preset_2 1198 1325 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu2g0251 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 951 972 IPR013087 -
Pvu2g0251 1496 ProSiteProfiles Zinc finger C2H2 type domain profile. 949 977 IPR013087 -
Pvu2g0251 1496 MobiDBLite consensus disorder prediction 910 940 - -
Pvu2g0251 1496 ProSiteProfiles SET domain profile. 1341 1473 IPR001214 GO:0005515
Pvu2g0251 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 882 903 IPR013087 -
Pvu2g0251 1496 Gene3D Classic Zinc Finger 799 872 - -
Pvu2g0251 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 814 835 IPR013087 -
Pvu2g0251 1496 ProSiteProfiles Zinc finger C2H2 type domain profile. 846 869 IPR013087 -
Pvu2g0251 1496 Gene3D SET domain 1180 1478 IPR046341 -
Pvu2g0251 1496 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1496 - -
Pvu2g0251 1496 SUPERFAMILY SET domain 1190 1486 IPR046341 -
Pvu2g0251 1496 Pfam Zinc finger C2H2-type, 3 repeats 848 973 IPR040689 -
Pvu2g0251 1496 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1496 - -
Pvu2g0251 1496 Pfam Pre-SET motif 1202 1333 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu2g0251 1496 SMART c2h2final6 880 903 IPR013087 -
Pvu2g0251 1496 SMART c2h2final6 846 869 IPR013087 -
Pvu2g0251 1496 SMART c2h2final6 812 835 IPR013087 -
Pvu2g0251 1496 SMART c2h2final6 949 972 IPR013087 -
Pvu2g0251 1496 SMART set_7 1341 1479 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0251 Pvu-Chr2 2579797 2594279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0251 129 1495 C2H2 Transcription Factor Family AT2G23740 52.121 0.0 1394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu2g0251 Pre-SET 1.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0251 - - gmx:100786757 2703.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0251 2 2579797 2594279 Pvu2g0251 2 2579797 2594279 ECH