Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0239 ATGTTTCTTCGCCGCCGTACAAATCTCGTTATAGTTCTTACGATCTTGATGGCGTGCACAGCAAGAGCGCAAAACGTCACCTGCAATAGGCAATGCGGGAAGCAGAGTCTTCAGTTCCCTTTCGGGTTCTCCGAGGGTTGTGAAATCAGACTAAACTGTTTCGACAACCAAGTCCAAATTTACGAATTTCTGGTCCAAAACGTTACCGACAGCAACATATTCGTCAACCTCCCTGGAAAATGCAACCGCAGAATGGAATCCATTGAGCCACTTTTCCAAAGCAATTTTGCTCCCTCGGTTAACAACAGCTTTTTGGTGCAAAATTGCAGCGAGCAGTTTGGTGGGTGCGTTATTCCTGCTTCGAATTTTGGGGAAAGCTGCGATAAGAAAAGTGGTAATATCAGTTGCTTTTCGAAACAAGATGGGGCGGATGTTGTGAAATACACAGATTTGAATGGAACTAAGTGTAAGTACTTGTTCTCTGCGGTTTCTTTTGGGCAGAGCCATGAGACTGTGCTGCAGTTTCAGATGGTCGAGTTGGGGTGGTGGCTTCATGGACAGTGTGATGAATGTTCTGACAACTCTACCTGCACACCGGTCCCTCTCCAAGGAGGTTTTCGGTGCCAGTGTATCCATGGCTTCACCGGCGACGGCTTCAGAATGGGCACCGGTTGCCGGAAAACTTCGGCTTCAAGTTGCAGTGCTTCAACACTAACTTCCGGGGGATGTGGAAAAGCAACCAAAATCGGTGTCGCTGTTGGAGCAATCATAGCTGGAGCTTTGGTGATGGCTGGTCTGTTTCTTCTATGCTACTGTGCTAGGCGCCGTTCTATTTGGTTGGGAAAACATACCAGAGTAAAGCGCCAATTACGTGAAGCTGCAGGCAACTCAAGCATACCTTTCTATCCCTACAAAGAAGTAGAAAAAGCCACAAATTCTTTCTCTGAGAAACACAGGCTGGGAACTGGGGCATTTGGTACAGTTTATGCCGGGAAACTGCACAATGATGAATGGGTTGCTATAAAGAAGTTAAGGCAAAGAGACACCAATAGTGCTGACCAAGTCATGAACGAGATCAAGCTCCTTACTTCAGTGAGTCACCCAAATTTAGTTCGCCTCTTAGGTTGCTGCGTAGAGAAGGGAGAACAGATCCTTGTTTATGAATTTATGCAAAATGGAACACTTTCACAGCACTTGCAGAGAGAGAGGAGTGAAGGACTACCGTGGACAGTAAGACTTACCATTGCTACTGAAACTGCTAATGCTATAGCATATCTTCATTCCGAAATCCATCCCCCAATTTACCACAGAGACATAAAATCTAGTAATATACTTTTGGATTATCAATTCAAATCAAAGATAGCTGATTTTGGGCTTTCTAGGCTTGGCTTGACAGAAACATCTCATATCTCAACCGCTCCACAAGGGACTCCGGGTTATGTCGATCCCCAATATCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTGTACAGTTTTGGAGTTGTCTTGGTAGAGATAATAACTGCCATGAAAGCGGTTGATTTTTCTCGACCTCGGACTGAGGTTAACTTAGCTGCACTTGCCGTAGATAGGATTAGGAGGGGTGCTGTAGATGAGATCATAGACCCCTTCCTTGAACCACATAGAGATGCTTGGACACTATATTCTATTCATAAGGTAGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATGGAAGTGGCAGAGGAGCTAGAACACATTAAACGCAGTGGATGGGCATCTATGGAGGAAACTGCCATGGCTTCATCGAATGGGTCCACTTGTTCATCACCTCGCAATGGAAGTGAGAAGTCACTGAGTGGTATAAACAAGGCGGGCCAAGGGAGTGCGAGATTGATAGTTCCGCAGAAGATTGAGAGATTTTTTCATTCTGTGGAGCTGAAGGACAGTTCTCCTGTATCAGTGCATGATCCTATTCATTGGTCGAGTGGACACAGCTCACCTTCGTCAAACAGCTTGTTGGTAAATGTCATCCCCTGA 2046 0.4536 MFLRRRTNLVIVLTILMACTARAQNVTCNRQCGKQSLQFPFGFSEGCEIRLNCFDNQVQIYEFLVQNVTDSNIFVNLPGKCNRRMESIEPLFQSNFAPSVNNSFLVQNCSEQFGGCVIPASNFGESCDKKSGNISCFSKQDGADVVKYTDLNGTKCKYLFSAVSFGQSHETVLQFQMVELGWWLHGQCDECSDNSTCTPVPLQGGFRCQCIHGFTGDGFRMGTGCRKTSASSCSASTLTSGGCGKATKIGVAVGAIIAGALVMAGLFLLCYCARRRSIWLGKHTRVKRQLREAAGNSSIPFYPYKEVEKATNSFSEKHRLGTGAFGTVYAGKLHNDEWVAIKKLRQRDTNSADQVMNEIKLLTSVSHPNLVRLLGCCVEKGEQILVYEFMQNGTLSQHLQRERSEGLPWTVRLTIATETANAIAYLHSEIHPPIYHRDIKSSNILLDYQFKSKIADFGLSRLGLTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKAVDFSRPRTEVNLAALAVDRIRRGAVDEIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPTMMEVAEELEHIKRSGWASMEETAMASSNGSTCSSPRNGSEKSLSGINKAGQGSARLIVPQKIERFFHSVELKDSSPVSVHDPIHWSSGHSSPSSNSLLVNVIP* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0239 681 ProSiteProfiles EGF-like domain profile. 184 220 IPR000742 -
Pvu2g0239 681 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 19 628 - -
Pvu2g0239 681 Gene3D Laminin 182 222 - -
Pvu2g0239 681 Gene3D Phosphorylase Kinase; domain 1 276 389 - -
Pvu2g0239 681 Gene3D Transferase(Phosphotransferase) domain 1 390 608 - -
Pvu2g0239 681 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Pvu2g0239 681 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 628 IPR045274 GO:0007166
Pvu2g0239 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Pvu2g0239 681 ProSitePatterns Protein kinases ATP-binding region signature. 320 343 IPR017441 GO:0005524
Pvu2g0239 681 SMART serkin_6 314 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0239 681 Pfam Protein tyrosine and serine/threonine kinase 317 586 IPR001245 GO:0004672|GO:0006468
Pvu2g0239 681 SUPERFAMILY Protein kinase-like (PK-like) 294 587 IPR011009 -
Pvu2g0239 681 MobiDBLite consensus disorder prediction 600 624 - -
Pvu2g0239 681 ProSiteProfiles Protein kinase domain profile. 314 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0239 Pvu-Chr2 2498853 2503451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0239 1 679 Receptor kinase-like Gene Family AT2G23450 54.468 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pvu2g0239 PK_Tyr_Ser-Thr 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0239 - - gmx:100779130 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0239 2 2498853 2503451 Pvu3g2566 3 47578853 47583238 PCT