Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0220 ATGGATCGGCCGGCCACCGGAGTCATGCCGTTCATGCCGATCATGCACGATAGCGACCGTTACGATTTCGTTCGCGATATCGGGTCTGGGAATTTCGGCGTTGCTAGACTTATGAGGGATAAGCAAACGCAAGAGCTTGTCGCCGTCAAGTATATAGAACGCGGAGACAAGATTGATCAAAATGTTAAAAGAGAAATCATTAATCACAGGTCTCTAAGACATCCTAACATTATCAGGTTTAAGGAGGTCATTTTAACACCTACCCATCTTGCCATTGTAATGGAATTTGCATCTGGAGGAGAATTATTTGCCCGAATCTGCAATGCAGGGCGTTTTACTGAGGATGAGGCTCGTTTTTTCTTTCAACAACTCATATCTGGGGTCAGCCATTTGCATGCAATGGAAGTGTGTCACCGGGACTTGAAGTTGGAAAACACTTTGTTGGATGGAAGCCCGGCAATCCATTTGAAGATATGTGATTTTGGATATTCCAAGTCTTCAATGCTGCATTCACAACCTAACTCAACTGTGGGAACCCCTGCATATATTGCTCCAGAAGTATTGCTGAATCAAGAGTATGATGGCAAGATTGCGGATGTATGGTCATGTGGGGTAACCTTATATGTGATGCTAGTGGGATCATATCCTTTTGAAGATCCTAAAGATCCAAAGGATTTCTGGAAGACAATGCAGAGGGTTCTTGCTGTCCAGTATTCCATTCCAGATGATATACAAATATCTCCAGAGTGTGGCCACCTTATCTCAAAGATATTTGTTTCTGACCCTGCAGAGAGAATCACTATTCCTGAAATATTGAAAAATGAATGGTTTCTGAAGGATCTCCCTCCTTACTTGATGGATGAAAATATCATGGGTAAGCAATTTGTAGAGTCGGATCAGCCTATGCAGAGCATTGATACAATTATGCAGATAATTTCAGAAGCTACCGTACCAGCCGCAGGGATCTATTCTTTAGACCAGTTTATGGCTGATAACATAATAGATTATGACATGGATGAATCAGACTCTGACTTCGAGCAAGATGTAGATAGCAGTGGGGAGATAGTGTATGCCATATAA 1080 0.4231 MDRPATGVMPFMPIMHDSDRYDFVRDIGSGNFGVARLMRDKQTQELVAVKYIERGDKIDQNVKREIINHRSLRHPNIIRFKEVILTPTHLAIVMEFASGGELFARICNAGRFTEDEARFFFQQLISGVSHLHAMEVCHRDLKLENTLLDGSPAIHLKICDFGYSKSSMLHSQPNSTVGTPAYIAPEVLLNQEYDGKIADVWSCGVTLYVMLVGSYPFEDPKDPKDFWKTMQRVLAVQYSIPDDIQISPECGHLISKIFVSDPAERITIPEILKNEWFLKDLPPYLMDENIMGKQFVESDQPMQSIDTIMQIISEATVPAAGIYSLDQFMADNIIDYDMDESDSDFEQDVDSSGEIVYAI* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0220 359 Gene3D Transferase(Phosphotransferase) domain 1 97 283 - -
Pvu2g0220 359 Pfam Protein kinase domain 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0220 359 PANTHER SERINE/THREONINE KINASE 13 353 - -
Pvu2g0220 359 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Pvu2g0220 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Pvu2g0220 359 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Pvu2g0220 359 SUPERFAMILY Protein kinase-like (PK-like) 9 319 IPR011009 -
Pvu2g0220 359 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 13 353 - -
Pvu2g0220 359 ProSiteProfiles Protein kinase domain profile. 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0220 359 SMART serkin_6 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0220 Pvu-Chr2 2354541 2360207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0220 20 281 CBL-interacting serine-threonine protein kinases AT5G25110 41.606 1.91e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pvu2g0220 Pkinase 2.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0220 K14498 - gmx:100783967 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0220 2 2354541 2360207 Pvu3g3021 3 51907761 51912761 PCT
Pvu3g2541 3 47254356 47259626 Pvu2g0220 2 2354541 2360207 PCT