Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0215 ATGCGCTGGTTCCCCACCATCATCTTCTCTCATTCTAATTCATCCTCTTCACCATCACCGTCACCATCGTCGTCGTCAACGCCGACGTCTTCTTTGGCCACTCTCAAATCTTCCGCTTCCACGTCATCATCCGTGTCCCACACCGGGAGGAACACCCGCTCCGCCTGGTTCTTTGGCGGCACCAGAAGGTCGACGCGCTCCAGGAAGCTGAGCCATGTGGCGGACATAGACGCCGTCGTCATCACCCCCTTGTCTCGCTCCACCAGCACCTTCGATCGTTCCTCTACCCCCTCCGCCGAACCTCAGCCGTTACCCTTGCCCAGAGCCATCGACTCCCGTTTACCCTCTCCCAAAGATGCCGCCGACAAACCCAACGCCGTCGTCGATTTTACCCTCCCCGCTGGTTTTCAAATGCGCAGCGTATTCGCGAGGCAAGAGAATAGAAATAATACGGAGCACGTGGAGACAAGGTCACCAGGGGTGGTGCCTCAGCAAGACACGAGCGGTTGTGCAAGTACAAGAGCCCAAGGAAATAACTTCTGGTTGAGTGTCCCTGCAAGAAGTGCTCCAACGAGTCCTTTTGCCAGTCCCAGAATCATCCCAAACACTACCAAAACCGATGATTTTGTCCCGTACTATTATGTGTCACCCAAAGCCAACCAGTTCTGGTCAGCACCAGAGATGCCAACATCCGACCCTTCAGCTGGGCACCCACCTCCTGCTTTCTTTGATTTATCAGCACTGCGCACTGATACCATCCTTTCTCCCCATCAAAGCCCACCGGGAAAAAGCCCCACCCAACACCCCAAAAGCCCCAATGCCCATTCTTCTTTTTCATCTCCATCCATACCCCCCAAGTTATCCCTTGACATCTCAATGGCACGTCGGGAAATTACTCCTCCTCAATTTGTCCACCCCTTACCTTTGCCTCCTTGGGCTGGGCCTGTGGCTCCCTTGCTTTCACCATCTGCTACCTTTTCCCCTCCTGTTGCTAAAACAGAATCCTTGCCAATGAAAAACCAGTGGCAAAAGGGGAAACTTATTGGCCGAGGTACTTTTGGATCTGTTTATGTTGCCACCAATAGAAAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAAGTCTTTTCCGATGATCCAAAATCTGCAGAGTGCATAAGGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAACTGAAACATCCAAACATTGTGCAGTATTTTGGTAGCGAAATAGTAGAAGACAGGTTTTATATCTATTTGGAATATGTACATCCTGGTTCAATGAATAAATACGTTCGTGAACATTGTGGTGCAATAACCGAATGTGTTGTTCGGAGTTTCACGCGCCATATTCTTTCGGGGTTGGCTTACTTGCATAGCAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGATTCTGCTGGTGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAACATCTAACTGGACACGTTGCAGAACTTTCTTTGAAGGGAAGTCCATATTGGATGGCTCCAGAGCTTATGCAAGCAGTTGTGCAAAAAGGGAATAGCACTGAAGTAGCTTTTGCTGTTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTTACGGGAAAGCCTCCTTGGAGTGAGTACGAAGGAGCCGCAGCTATGTTTAAGGTTATGAAAGATACACCTCCTATACCAGAAACATTGTCAGCTGAAGATGTTTCGTGTTCCACGCATCTGTATAATGGAACACCCTTTATGGATATCCATAGTCTCCGAGAGCTATCTGACAATAGATTTCATCACATTTCCATTTCCAGTGCACATATTGCTGAGGGGAAATAG 1854 0.4822 MRWFPTIIFSHSNSSSSPSPSPSSSSTPTSSLATLKSSASTSSSVSHTGRNTRSAWFFGGTRRSTRSRKLSHVADIDAVVITPLSRSTSTFDRSSTPSAEPQPLPLPRAIDSRLPSPKDAADKPNAVVDFTLPAGFQMRSVFARQENRNNTEHVETRSPGVVPQQDTSGCASTRAQGNNFWLSVPARSAPTSPFASPRIIPNTTKTDDFVPYYYVSPKANQFWSAPEMPTSDPSAGHPPPAFFDLSALRTDTILSPHQSPPGKSPTQHPKSPNAHSSFSSPSIPPKLSLDISMARREITPPQFVHPLPLPPWAGPVAPLLSPSATFSPPVAKTESLPMKNQWQKGKLIGRGTFGSVYVATNRKTGALCAMKEAEVFSDDPKSAECIRQLEQEIKVLSQLKHPNIVQYFGSEIVEDRFYIYLEYVHPGSMNKYVREHCGAITECVVRSFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHVAELSLKGSPYWMAPELMQAVVQKGNSTEVAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSAEDVSCSTHLYNGTPFMDIHSLRELSDNRFHHISISSAHIAEGK* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0215 617 SUPERFAMILY Protein kinase-like (PK-like) 332 575 IPR011009 -
Pvu2g0215 617 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Pvu2g0215 617 MobiDBLite consensus disorder prediction 268 283 - -
Pvu2g0215 617 Gene3D Transferase(Phosphotransferase) domain 1 338 595 - -
Pvu2g0215 617 MobiDBLite consensus disorder prediction 147 172 - -
Pvu2g0215 617 MobiDBLite consensus disorder prediction 10 52 - -
Pvu2g0215 617 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 575 - -
Pvu2g0215 617 MobiDBLite consensus disorder prediction 253 283 - -
Pvu2g0215 617 Pfam Protein kinase domain 343 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0215 617 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 575 - -
Pvu2g0215 617 MobiDBLite consensus disorder prediction 86 122 - -
Pvu2g0215 617 MobiDBLite consensus disorder prediction 154 172 - -
Pvu2g0215 617 SMART serkin_6 342 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0215 617 ProSiteProfiles Protein kinase domain profile. 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0215 Pvu-Chr2 2290030 2294494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0215 178 575 MAP Kinase Kinase Kinase AT5G66850 63.043 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu2g0215 Pkinase 2.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0215 - - pvu:PHAVU_002G021100g 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0215 2 2290030 2294494 Pvu3g2536 3 47205695 47210960 PCT