Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0212 ATGGGTCTCTGCACTTCCAAACCCACTCTCTCCTCTCCCCAATCCACCACTCACTCCCCCGTGCGACCTTCTCAAAACGGGGCTGTCGCAATCACTGACAGTCACAGCGCCGAACCTCACGTGCACAGCACCAATGGCGAGAGCGAAAACCCTAAGGAGCTGGAGAACGGTAAGAGATCTCCTTTCTTCCCATTCTACAGTCCGAGTCCGGGCCGCTACGTGTTCCCCGTCTCACCGCACCGCTTCTTCAAGCGATCGTTTCTGTCGCCCTCGCCGGCGAAACACATAAGGGCGGCGCTGGCGCGGCGGCACGGGTCGGTGAAACCCAACGAGGCTGCCATACCGGAGGCGGAGGCGGTCGCGGGGCTCGACAAGAACTTCGGATTCTCCAAACATTTGGGAAATAAGTATGAAGTTGGAGATGAAGTTGGGAGAGGGCATTTTGGATACACTTCTGTTGCTAAGGTGAAAAAAGGAGAGCTGAAGGGACAACAAGTGGCCGTTAAAGTCATTCCGAAAGCCAAGATGACCACTGCAATTGCTATTGAAGATGTGAGAAGGGAGGTAAAAATATTGAGAGCTTTGACTGGGCACAAGAATCTAGTACAATTCTATGATGCATATGAAGACCATAATAATGTCTATATTGTAATGGAGTTGTGTGAAGGAGGAGAACTGTTAGACAGAATATTGTCAAGAGGTGGGAAGTACACAGAGGAAGAAGCAAAAGTTGTCCTGAGACAAATACTGAATGTTGTTGCCTTTTGCCATCTTCAGGGTGTCGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTCACATCCATGGACGAGAACTCAAACCTGAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACCGGATGAAAGACTTAATGATATTGTTGGCAGTGCATATTATGTGGCTCCCGAAGTTCTACATAGAGCTTACGGTACAGAAGCTGATGTCTGGAGTATTGGAGTGATTGCATATATTTTATTATGTGGCAGTCGTCCCTTTTGGGCCCGGACTGAGTCTGGTATCTTCCATGCGGTATTAAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTCTGACAGATGAGGCAACAAATTTTGTTATGCGATTACTAAATAAAGATCCACGTAAAAGAATGTCTGCAGCACAGGCGTTAAGTCATCCATGGATTAAAAACAAGGATGTGAAAGTACCTCTGGATATTCTAATATTCAAGCTCATGAAGGCATACATGCGTTCCTCATCTTTACGGAAAGCGGCTTTAAGGGCTCTGTCCAAGACGTTAACTGTGGACGAGTTATTTTATTTGAGGGAGCAGTTTGCACTTTTAGAGCCAAGCAAAAATGGCTCCATTAGCTTGGAAAATATCAAAGCGGTCTTGATGGTGAATGCAACAGATGCTATGAACGAGTCACGCGTACCTGACTTTCTGACATCACTTAATGCATTACAATTTAGAAGGATGGATTTTGATGAGTTCTGTGCGGCTGCCCTTAGTGTTCATCAACTTGAAACACATGACCAGTGGGAGCAACGTGCACGTTATGCTTACGAACTTTTTGAGAAGGACGGAAACAAGGCCATAGTCATTGACGAACTAGCTTCGGAGCTTGGTCTTGGTCCATCTGTCCCTGTTCATGCTGTTCTCCATGATTGGATTCGGCACACTGATGGAAAATTAAGTTTCCTTGGGTTTGTCAAACTGTTGCATGGCCCATCTAGAAGTCTTGCAAAAGCTCAATAG 1770 0.4616 MGLCTSKPTLSSPQSTTHSPVRPSQNGAVAITDSHSAEPHVHSTNGESENPKELENGKRSPFFPFYSPSPGRYVFPVSPHRFFKRSFLSPSPAKHIRAALARRHGSVKPNEAAIPEAEAVAGLDKNFGFSKHLGNKYEVGDEVGRGHFGYTSVAKVKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHNNVYIVMELCEGGELLDRILSRGGKYTEEEAKVVLRQILNVVAFCHLQGVVHRDLKPENFLFTSMDENSNLKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYGTEADVWSIGVIAYILLCGSRPFWARTESGIFHAVLKADPSFDEPPWPSLTDEATNFVMRLLNKDPRKRMSAAQALSHPWIKNKDVKVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTVDELFYLREQFALLEPSKNGSISLENIKAVLMVNATDAMNESRVPDFLTSLNALQFRRMDFDEFCAAALSVHQLETHDQWEQRARYAYELFEKDGNKAIVIDELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0212 589 SUPERFAMILY EF-hand 426 580 IPR011992 -
Pvu2g0212 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 584 - -
Pvu2g0212 589 MobiDBLite consensus disorder prediction 40 56 - -
Pvu2g0212 589 MobiDBLite consensus disorder prediction 1 60 - -
Pvu2g0212 589 Gene3D - 423 577 - -
Pvu2g0212 589 CDD STKc_CAMK 136 398 - -
Pvu2g0212 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Pvu2g0212 589 Gene3D Transferase(Phosphotransferase) domain 1 226 417 - -
Pvu2g0212 589 Gene3D Phosphorylase Kinase; domain 1 130 225 - -
Pvu2g0212 589 ProSiteProfiles Protein kinase domain profile. 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0212 589 SUPERFAMILY Protein kinase-like (PK-like) 134 431 IPR011009 -
Pvu2g0212 589 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 44 584 - -
Pvu2g0212 589 Pfam Protein kinase domain 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0212 589 ProSitePatterns Protein kinases ATP-binding region signature. 143 169 IPR017441 GO:0005524
Pvu2g0212 589 SMART serkin_6 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0212 589 Gene3D - 418 507 - -
Pvu2g0212 589 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0212 Pvu-Chr2 2268335 2273883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0212 1 589 EF-hand Containing Proteins AT3G50530 70.515 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu2g0212 Pkinase 5.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0212 K00924 - gmx:100794177 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0212 2 2268335 2273883 Pvu3g3028 3 51981157 51986134 PCT
Pvu3g2531 3 47172141 47175624 Pvu2g0212 2 2268335 2273883 PCT