Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0186 ATGGACGTGGACATACTCAAAACTTCCACGAGTGACACCAGCATGGACATGATGATGATGATGCAAATGGAAAAGTTCCCCGAATTATGTGAACCTTTTTATAACACCACCACTCTTCTCTACCCAGAAAACGAGTTCTTAAGCTCCACCACCACACTGCCTGTCTTCTCCAACGATAACCCAAACGTTATATCTCCACCACACTCTTTGATCAATCCACCACCCCCTTCCTCCAGTTTTGGTCTCCAACAACCCATGACACCTCCTCCTCTTGAACCCAACCCTTCGTTTTCGGAGAAGAAGAATTCCGTGGCTGCCATGAGGGAGATGATTTTCCGCGTAGCAGTCATGCAACCTATTCATATAGACCCTGAGTCTATCAAGCCTCCGAAGAGAAGGAACGTGAAGATTTCGAAGGATCCGCAGAGTGTGGCAGCGAGGCACCGAAGGGAAAGGATAAGCGAACGAATAAGGATCCTTCAGAGATTAGTTCCTGGTGGGACCAAAATGGACACGGCTTCTATGTTGGATGAAGCCATACACTACGTAAAGTTCTTGAAGAAACAAGTGCAGACGCTGGAACAAGCGGGAGCAACAAGACCCTTGAGTGTTTTTGGCTTCCCTGGTACTGTGTCCAACGCCAATAATAACGTTAATTATTCTTCTTTTGTCAAGAGTTGCCAACCGTGCCATATGCTGGGTTCTGCAGCTTCTAAACACATGCTGAGTTGA 732 0.4686 MDVDILKTSTSDTSMDMMMMMQMEKFPELCEPFYNTTTLLYPENEFLSSTTTLPVFSNDNPNVISPPHSLINPPPPSSSFGLQQPMTPPPLEPNPSFSEKKNSVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGATRPLSVFGFPGTVSNANNNVNYSSFVKSCQPCHMLGSAASKHMLS* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0186 243 MobiDBLite consensus disorder prediction 71 95 - -
Pvu2g0186 243 Pfam Helix-loop-helix DNA-binding domain 147 186 IPR011598 GO:0046983
Pvu2g0186 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 196 IPR036638 GO:0046983
Pvu2g0186 243 Coils Coil 176 196 - -
Pvu2g0186 243 MobiDBLite consensus disorder prediction 71 96 - -
Pvu2g0186 243 CDD bHLH_AtIND_like 138 194 - -
Pvu2g0186 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 186 IPR011598 GO:0046983
Pvu2g0186 243 SMART finulus 143 192 IPR011598 GO:0046983
Pvu2g0186 243 Gene3D - 136 201 IPR036638 GO:0046983
Pvu2g0186 243 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 231 IPR045843 GO:0003700|GO:0006355
Pvu2g0186 243 PANTHER TRANSCRIPTION FACTOR HEC2 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0186 Pvu-Chr2 2007155 2007886 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0186 23 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 58.065 2.19e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu2g0186 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0186 - - gmx:100796649 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0186 2 2007155 2007886 Pvu2g0186 2 2007155 2007886 ECH