Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0184 ATGAACTGGGTTCGTGGAGACTCACTCGGCCATGGAACCTTCGCCACCGTCAACATCGTCGTGCCTGCAAACGGCTCCACTTTTTTCCCTTCACCAGCCGCCGTCAAATCCTCTCTTTCCCACAACGCGGGTTTGCTAGAAAACGAAAAGGAGATACTCAGTCGCCTTGGCTCTTCCCCTCACATCATCAACTGTTTAGGTCACGATCACACCATTGAGAACGGCGTGGAGTTCTACAACGTCTTTCTCGAACAGGCCGCCGGAGGTTCCCTCGCCGATCAGGTCAAGAAACACGGCGGAAGTCTCCCGGAGTCTTTCGTGCGGCGATGTACAAGGTCCATTGTGGAAGGGCTTAGACACATTCACGAGCACGGTTTTGTTCACTGCGACGTGAAGCTTCAAAACGTTCTCGTTTTCGACAACGGCAAGGTGAAAATAGCAGACTTCGGGCTCGCCAAGGAGAAGGGGGAGAAACATGGGAAGTGCGAGTGCAGGGGAACGCCGTTGTTTATGTCACCGGAATCGGTGAACGACAATGAGTATGAGCCGCCGGCGGATATTTGGGCCCTGGGATGCGCCGTCGTGGAGATGGCGACCGGAAAACCCGCGTGGGATATTCGCGACGGATCGAGTATTTGGTCATTATTGGTTCGGATTGGAGTGGGAGAAGAATTGCCGAAGATTCCAGAAGATTTGTCGGAAGAGGGGAAGGACTTTTTGGGAAAGTGCTTTGTTAAGGATCCGACGAAGAGGTGGAGCGCTGAGATGCTTCTCAAACACCCTTTCATCAAAGTTGATTCAATTTCTTTTGATAAAGTTCATGAGCCGTTATCGCCGCCGTCACCAAGTACCCACTTCGATTTTCCTCACTGGGCTTCCACCGTAACGGCTTCGCTCCCGTCTTCCCCGTATTCCGACGAGTGGCCTGGGTGGTCGTGTACGCCGGAGAGTCGTCTCCGGCGGCTTGTTACTGATAAGAGACCGGAGAATTGGTCAGAATTAGATGGCTGGATGAGAGTTAGGTGA 1026 0.5292 MNWVRGDSLGHGTFATVNIVVPANGSTFFPSPAAVKSSLSHNAGLLENEKEILSRLGSSPHIINCLGHDHTIENGVEFYNVFLEQAAGGSLADQVKKHGGSLPESFVRRCTRSIVEGLRHIHEHGFVHCDVKLQNVLVFDNGKVKIADFGLAKEKGEKHGKCECRGTPLFMSPESVNDNEYEPPADIWALGCAVVEMATGKPAWDIRDGSSIWSLLVRIGVGEELPKIPEDLSEEGKDFLGKCFVKDPTKRWSAEMLLKHPFIKVDSISFDKVHEPLSPPSPSTHFDFPHWASTVTASLPSSPYSDEWPGWSCTPESRLRRLVTDKRPENWSELDGWMRVR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0184 341 CDD STKc_MAPKKK 2 263 - -
Pvu2g0184 341 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 297 - -
Pvu2g0184 341 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Pvu2g0184 341 ProSiteProfiles Protein kinase domain profile. 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0184 341 SUPERFAMILY Protein kinase-like (PK-like) 3 307 IPR011009 -
Pvu2g0184 341 Pfam Protein kinase domain 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0184 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Pvu2g0184 341 Gene3D Transferase(Phosphotransferase) domain 1 2 285 - -
Pvu2g0184 341 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 297 - -
Pvu2g0184 341 SMART serkin_6 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0184 Pvu-Chr2 1982932 1983957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0184 1 341 MAP Kinase Kinase Kinase AT4G36950 51.873 3.58e-114 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu2g0184 Pkinase 4.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0184 - - gmx:100782937 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0184 2 1982932 1983957 Pvu2g0184 2 1982932 1983957 ECH
Pvu2g0184 2 1982932 1983957 Pvu3g2503 3 46735442 46736476 PCT